RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 VPS26BQ4G0F5 336 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 SFT2D3Q587I9 215 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 ANXA8L1Q5VT79 327 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 SLC2A7Q6PXP3 512 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 BLOC1S3Q6QNY0 202 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 MED25Q71SY5 747 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 ERMP1Q7Z2K6 904 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 ZNF551Q7Z340 670 aaPredicted RBP11.53□□□□□ -0.56
TRAIP-209ENST00000488860 RAB43Q86YS6 212 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 TREML1Q86YW5 311 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 ST13P4Q8IZP2 240 aaPredicted RBP11.53□□□□□ -0.56
TRAIP-209ENST00000488860 ADCY4Q8NFM4 1077 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 OR8J2Q8NGG1 315 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 SNIP1Q8TAD8 396 aaKnown RBP11.53□□□□□ -0.56
TRAIP-209ENST00000488860 ZNF681Q96N22 645 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 AMDHD1Q96NU7 426 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 EFHD1Q9BUP0 239 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 CNPPD1Q9BV87 410 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 GLIPR2Q9H4G4 154 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 RMND5AQ9H871 391 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 ADAP2Q9NPF8 381 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 TAS2R7Q9NYW3 318 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 PCDHGA6Q9Y5G7 932 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 CLDN16Q9Y5I7 305 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 HS3ST3B1Q9Y662 390 aa11.53□□□□□ -0.56
TRAIP-209ENST00000488860 LOC100653049A0A140TA62 436 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 CDC14CA4D256 554 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 SYNDIG1LA6NDD5 238 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 C1QTNF9BB2RNN3 333 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 C17orf105B2RV13 164 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 RNASET2O00584 256 aaKnown RBP11.52□□□□□ -0.57
TRAIP-209ENST00000488860 DYRK3O43781 588 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 CREG1O75629 220 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 KRT34O76011 436 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 SEC24DO94855 1032 aaPredicted RBP11.52□□□□□ -0.57
TRAIP-209ENST00000488860 C1QTNF9P0C862 333 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 SLC35E2P0CK97 266 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 PRKAR1AP10644 381 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 MMP11P24347 488 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 ADSLP30566 484 aaPredicted RBP11.52□□□□□ -0.57
TRAIP-209ENST00000488860 CDK9P50750 372 aaKnown RBP11.52□□□□□ -0.57
TRAIP-209ENST00000488860 WNT3P56703 355 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 PHC1P78364 1004 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 CYLC2Q14093 348 aaPredicted RBP11.52□□□□□ -0.57
TRAIP-209ENST00000488860 SSPNQ14714 243 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 ELAVL1Q15717 326 aaKnown RBP11.52□□□□□ -0.57
TRAIP-209ENST00000488860 MAPKAPK3Q16644 382 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 MMEL1Q495T6 779 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 C6orf10Q5SRN2 563 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 REP15Q6BDI9 236 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 PAPD4Q6PIY7 484 aaKnown RBP11.52□□□□□ -0.57
TRAIP-209ENST00000488860 TMEM205Q6UW68 189 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 TMEM107Q6UX40 140 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 UNQ6494/PRO21346Q6UXR6 183 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 DGAT2L6Q6ZPD8 337 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 CPEB2Q7Z5Q1 589 aaKnown RBP11.52□□□□□ -0.57
TRAIP-209ENST00000488860 PPP1R32Q7Z5V6 425 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 GALNT12Q8IXK2 581 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 FITM2Q8N6M3 262 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 NATD1Q8N6N6 113 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 VPS37AQ8NEZ2 397 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 SUN3Q8TAQ9 357 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 KAT2AQ92830 837 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 RIT1Q92963 219 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 RBM18Q96H35 190 aaKnown RBP11.52□□□□□ -0.57
TRAIP-209ENST00000488860 MAGED4Q96JG8 741 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 SLC25A23Q9BV35 468 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 ACSS1Q9NUB1 689 aaPredicted RBP11.52□□□□□ -0.57
TRAIP-209ENST00000488860 TMEM45AQ9NWC5 275 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 LEF1Q9UJU2 399 aaPredicted RBP11.52□□□□□ -0.57
TRAIP-209ENST00000488860 PCDHGB4Q9UN71 923 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 SNX8Q9Y5X2 465 aa11.52□□□□□ -0.57
TRAIP-209ENST00000488860 FREM2Q5SZK8 3169 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 CACNA1AO00555 2505 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 ASPDHA6ND91 283 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 SAGE2PA6NJ88 616 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 SOCS6O14544 535 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 RFXANKO14593 260 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 ANP32DO95626 131 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 ATP1B1P05026 303 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 CT62P0C5K7 136 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 COX4I1P13073 169 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 WT1P19544 449 aaPredicted RBP11.51□□□□□ -0.57
TRAIP-209ENST00000488860 MC3RP41968 323 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 FRKP42685 505 aaPredicted RBP11.51□□□□□ -0.57
TRAIP-209ENST00000488860 CDKN2CP42773 168 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 CPA2P48052 419 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 MRPS35P82673 323 aaKnown RBP11.51□□□□□ -0.57
TRAIP-209ENST00000488860 BIKQ13323 160 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 ATP1A4Q13733 1029 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 ZNF267Q14586 743 aaPredicted RBP11.51□□□□□ -0.57
TRAIP-209ENST00000488860 CEBPEQ15744 281 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 SPDYE7PQ495Y7 208 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 ATP1A1-AS1Q5TC04 95 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 FAM111BQ6SJ93 734 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 MSANTD1Q6ZTZ1 278 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 TRPM8Q7Z2W7 1104 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 MRGPREQ86SM8 312 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 VWA5B2Q8N398 1253 aa11.51□□□□□ -0.57
TRAIP-209ENST00000488860 C7orf57Q8NEG2 295 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms