RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 PRR33A8MZF0 331 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 MYO1GB0I1T2 1018 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 H3BNH8 94 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 K7ESF4 209 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 CASC3O15234 703 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZSCAN9O15535 394 aaPredicted RBP8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 BCHEP06276 602 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 THRBP10828 461 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 GSTM5P46439 218 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 PRKAG1P54619 331 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 CDH15P55291 814 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 RACK1P63244 317 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 RBBP4Q09028 425 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 PUM1Q14671 1186 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 LTB4RQ15722 352 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 DEFB110Q30KQ9 67 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 SPDYE7PQ495Y7 208 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 CRB2Q5IJ48 1285 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 TMEM107Q6UX40 140 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 CCDC80Q76M96 950 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 SATL1Q86VE3 508 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 DCP2Q8IU60 420 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR4N5Q8IXE1 308 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 GALNT15Q8N3T1 639 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 ARL14Q8N4G2 192 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 CAMKK1Q8N5S9 505 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 SRFBP1Q8NEF9 429 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 CADM4Q8NFZ8 388 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR5T3Q8NGG3 340 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 SPPL2AQ8TCT8 520 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 LMX1AQ8TE12 382 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 GAL3ST3Q96A11 431 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 YIPF4Q9BSR8 244 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 FAIM2Q9BWQ8 316 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 C8orf4Q9NR00 106 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZCCHC3Q9NUD5 404 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 UCKL1Q9NWZ5 548 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 ADPRHL2Q9NX46 363 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 SH3GLB1Q9Y371 365 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 KLK4Q9Y5K2 254 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 J3KTA2 159 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 B4GAT1O43505 415 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 HS6ST1O60243 411 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 SEMA7AO75326 666 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR6B1O95007 311 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR12D1P0DN82 309 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 EPHA2P29317 976 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 GPC1P35052 558 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 SOX18P35713 384 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 NUDT1P36639 197 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 TSFMP43897 325 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 DAPP51397 102 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 ARFIP1P53367 373 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 LIM2P55344 173 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 SIM1P81133 766 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 RGS1Q08116 209 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 KCNAB2Q13303 367 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 APOFQ13790 326 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 SYPL1Q16563 259 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZNF630Q2M218 657 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 SHQ1Q6PI26 577 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 PIWIL3Q7Z3Z3 882 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 GALNT5Q7Z7M9 940 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 HMGN2P46Q86SG4 172 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 COMTD1Q86VU5 262 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 ST13P4Q8IZP2 240 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 SVOPLQ8N434 492 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 NATD1Q8N6N6 113 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 PRSS33Q8NF86 280 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR9A2Q8NGT5 310 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 C16orf58Q96GQ5 468 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 TMEM19Q96HH6 336 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 BBS4Q96RK4 519 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 RUBCNLQ9H714 662 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 IL21RQ9HBE5 538 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 PNPLA3Q9NST1 481 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 FAM118AQ9NWS6 357 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 PADI2Q9Y2J8 665 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 SAMHD1Q9Y3Z3 626 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 ENTPD2Q9Y5L3 495 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 KCNE3Q9Y6H6 103 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 PCDH15Q96QU1 1955 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 NINQ8N4C6 2090 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 CCDC88CQ9P219 2028 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 A0A0J9YY10 115 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 CLPTM1O96005 669 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 ALBP02768 609 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 HMGN2P05204 90 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZNF24P17028 368 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 ELK4P28324 431 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 MC3RP41968 323 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 SRSF5Q13243 272 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 LASP1Q14847 261 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 CEBPEQ15744 281 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 DEFB133Q30KQ1 61 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 REEP3Q6NUK4 255 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 RNF44Q7L0R7 432 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 WDR53Q7Z5U6 358 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 PATL1Q86TB9 770 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms