RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CCR6P51684 374 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 NCKAP1LP55160 1127 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 NPRL3Q12980 569 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 MMRN1Q13201 1228 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 FLOT2Q14254 428 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 MGAT5BQ3V5L5 792 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 CATSPEREQ5SY80 951 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 OR8G2PQ6IF36 304 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 DNAJC24Q6P3W2 148 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 ULK3Q6PHR2 472 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 RHBDF2Q6PJF5 856 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 VSTM1Q6UX27 236 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 CASP12Q6UXS9 341 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 CTAGE3PQ8IX95 158 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 KATNAL2Q8IYT4 538 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 SLC44A3Q8N4M1 653 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 NLGN4YQ8NFZ3 816 aaPredicted RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 OR1M1Q8NGA1 313 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 ZFP90Q8TF47 636 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 DCAKDQ8WVC6 231 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 RAB1CQ92928 201 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 FAM120BQ96EK7 910 aaKnown RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 PFDN5Q99471 154 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 PTPN18Q99952 460 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 CMSS1Q9BQ75 279 aaKnown RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 ARHGAP9Q9BRR9 750 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 C11orf84Q9BUA3 381 aaPredicted RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 COLEC11Q9BWP8 271 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 SMURF1Q9HCE7 757 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 VAPAQ9P0L0 249 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 MSRAQ9UJ68 235 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 GDF2Q9UK05 429 aaPredicted RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 IGLON5A6NGN9 336 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 AQP12BA6NM10 295 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 E5RI56 91 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 INPP4BO15327 924 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 TNFAIP8O95379 198 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 SERPINA3P01011 423 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 PPIAL4GP0DN37 164 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 MATN1P21941 496 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 DTYMKP23919 212 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 TIMP3P35625 211 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 CEACAM3P40198 252 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 TDGF1P3P51864 188 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 HMGCS2P54868 508 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 CCNIQ14094 377 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 MPP2Q14168 576 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 ANGPT1Q15389 498 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 P2RY14Q15391 338 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 PLEKHN1Q494U1 663 aaPredicted RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 TIGD5Q53EQ6 642 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 C9orf64Q5T6V5 341 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF618Q5T7W0 954 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 CERS6Q6ZMG9 384 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 TRIM46Q7Z4K8 759 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 COMMD7Q86VX2 200 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 GUF1Q8N442 669 aaKnown RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 RBM15BQ8NDT2 890 aaKnown RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 BAHD1Q8TBE0 780 aaPredicted RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 C1QTNF6Q9BXI9 259 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 NT5DC2Q9H857 520 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 NMNAT1Q9HAN9 279 aaPredicted RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 PAK6Q9NQU5 681 aaPredicted RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF701Q9NV72 531 aaPredicted RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 FAM118AQ9NWS6 357 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 IMPAD1Q9NX62 359 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 GCNT4Q9P109 453 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 MGAT4BQ9UQ53 548 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 PRSS21Q9Y6M0 314 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 FABP12A6NFH5 140 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 FAM170BA6NMN3 283 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 LRRN3E7EW58 273 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 F5H6K3 240 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 I3L521 148 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 CBX4O00257 560 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 ACKR2O00590 384 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 TULP3O75386 442 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 NME6O75414 186 aaPredicted RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 ACSL3O95573 720 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 CPNE6O95741 557 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 WNT11O96014 354 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 CKMP06732 381 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 FGF2P09038 288 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 OR8U8P0C7N1 319 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 ATXN1LP0C7T5 689 aaKnown RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF182P17025 639 aaPredicted RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 ITGB5P18084 799 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 CD80P33681 288 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 MAS1LP35410 378 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 IL12RB1P42701 662 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 YAP1P46937 504 aaKnown RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 RNASE9P60153 205 aaKnown RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 KLRC3Q07444 240 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 MTFR1Q15390 333 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 RNFT1Q5M7Z0 435 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 PDZK1Q5T2W1 519 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 FAHD2BQ6P2I3 314 aaPredicted RBP4.63□□□□□ -1.67
NPHP3-206ENST00000474871 ANKRD33Q7Z3H0 272 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 PLCZ1Q86YW0 608 aa4.63□□□□□ -1.67
NPHP3-206ENST00000474871 TBCKQ8TEA7 893 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms