RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 USP53Q70EK8 1073 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 PDZD4Q76G19 769 aaPredicted RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 GPC2Q8N158 579 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 TOP6BLQ8N6T0 577 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ZNF540Q8NDQ6 660 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 FBXO22Q8NEZ5 403 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 UBA3Q8TBC4 463 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ZNF431Q8TF32 576 aaPredicted RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 SCARB1Q8WTV0 552 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 SGTBQ96EQ0 304 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 SMOQ99835 787 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 PBX4Q9BYU1 374 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 NXF3Q9H4D5 531 aaKnown RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 PRDM13Q9H4Q3 707 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 EVA1AQ9H8M9 152 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 UNKLQ9H9P5 680 aaKnown RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 CYP4F12Q9HCS2 524 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 TRMT13Q9NUP7 481 aaKnown RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 ZNF229Q9UJW7 825 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ANAPC10Q9UM13 185 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 BTBD3Q9Y2F9 522 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 SNX5Q9Y5X3 404 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ADAMTS9Q9P2N4 1935 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 RAB19A4D1S5 217 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 A8MUA0 341 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 TBX6O95947 436 aaPredicted RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 B3GALT4O96024 378 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 HIST1H2ABP04908 130 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 SERPIND1P05546 499 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 TNNI1P19237 187 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 MAPK1P28482 360 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 AGTR2P50052 363 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 P2RY4P51582 365 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 AP1S1P61966 158 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 PPIGQ13427 754 aaKnown RBP eCLIP3.88□□□□□ -1.79
USP16-205ENST00000474835 GRM7Q14831 915 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 PTGES3Q15185 160 aaKnown RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 CYB5RLQ6IPT4 315 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 PLBD1Q6P4A8 553 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 HIST3H2AQ7L7L0 130 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 DPH6Q7L8W6 267 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 LDLRAD3Q86YD5 345 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 EFHBQ8N7U6 833 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 PTGR2Q8N8N7 351 aaPredicted RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 GPR32P1Q8NGA4 272 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 SPATA22Q8NHS9 363 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 HIST1H2ACQ93077 130 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 FAM149B1Q96BN6 582 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 PHYHIPLQ96FC7 376 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 WDR89Q96FK6 387 aaPredicted RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 ZBED2Q9BTP6 218 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ZNF436Q9C0F3 470 aaPredicted RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 SLC25A32Q9H2D1 315 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ADNPQ9H2P0 1102 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 UBQLN2Q9UHD9 624 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 RPS6KA6Q9UK32 745 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ZMIZ1Q9ULJ6 1067 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 C5orf42Q9H799 3197 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ADAMTS20P59510 1910 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 MBLAC1A4D2B0 266 aaPredicted RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 ANKDD1BA6NHY2 528 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 GABRR3A8MPY1 467 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 SNRPGP15A8MWD9 76 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 H7C417 338 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 INO80B-WBP1J3KQ70 363 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 NPC1O15118 1278 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 HCRTO43612 131 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 USP12O75317 370 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ATP6AP2O75787 350 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ARIH2O95376 493 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 VIPP01282 170 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 HPXP02790 462 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 CTSAP10619 480 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 SLC25A4P12235 298 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 AMD1P17707 334 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ENGP17813 658 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 SDC1P18827 310 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 CTSOP43234 321 aaPredicted RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 NUBP1P53384 320 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 HSF1Q00613 529 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 RUNX1T1Q06455 604 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 IL15RAQ13261 267 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 CDH18Q13634 790 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 PTPRRQ15256 657 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 OTUD3Q5T2D3 398 aaPredicted RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 OR5M10Q6IEU7 315 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 UNC5DQ6UXZ4 953 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 PDZD3Q86UT5 571 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 SPATA2LQ8IUW3 424 aaPredicted RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 SLC5A8Q8N695 610 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 RASGEF1AQ8N9B8 481 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 OR4A15Q8NGL6 344 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 OR6S1Q8NH40 331 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 OR10A6Q8NH74 314 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ZNF461Q8TAF7 563 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 HPSE2Q8WWQ2 592 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ACOT12Q8WYK0 555 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 TMEM143Q96AN5 459 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 EXOC2Q96KP1 924 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 PPP3R2Q96LZ3 170 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms