RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 CDX1P47902 265 aaPredicted RBP1.31□□□□□ -2.2
LRCH3-209ENST00000452660 MFAP3P55082 362 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 ADARP55265 1226 aaKnown RBP1.31□□□□□ -2.2
LRCH3-209ENST00000452660 UBASH3AP57075 661 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 CXCL6P80162 114 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 PAX2Q02962 417 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 RBPJQ06330 500 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 CNTN1Q12860 1018 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 CUL4AQ13619 759 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 ALCAMQ13740 583 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 SNTB1Q13884 538 aaKnown RBP1.31□□□□□ -2.2
LRCH3-209ENST00000452660 EBI3Q14213 229 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 ABRAXAS2Q15018 415 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 PRR4Q16378 134 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 GPR157Q5UAW9 335 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 ENPP7Q6UWV6 458 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 LYPD1Q8N2G4 141 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 TMEM99Q8N816 258 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 ZNRF1Q8ND25 227 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 CD99L2Q8TCZ2 262 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 VN1R17PQ8TDU5 208 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 ADAMTS16Q8TE57 1224 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 LIPHQ8WWY8 451 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 GCNAQ96QF7 691 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 CHCHD6Q9BRQ6 235 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 NACAP1Q9BZK3 213 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 FN3KQ9H479 309 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 VIPAS39Q9H9C1 493 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 PLEKHA3Q9HB20 300 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 PDE7BQ9NP56 450 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 SH3GLB2Q9NR46 395 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 PLSCR3Q9NRY6 295 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 ABCC13Q9NSE7 274 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 MORF4L1Q9UBU8 362 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 NAV2Q8IVL1 2488 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 DNHD1Q96M86 4753 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 MON2Q7Z3U7 1717 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 DOT1LQ8TEK3 1739 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 SBNO1A3KN83 1393 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 ARHGEF10O15013 1369 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 MAST4O15021 2626 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 KDM6AO15550 1401 aaPredicted RBP1.31□□□□□ -2.2
LRCH3-209ENST00000452660 ASPMQ8IZT6 3477 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 TPRP12270 2363 aaKnown RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 NCOR1O75376 2440 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 MAP1BP46821 2468 aaKnown RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 FRG2CA6NGY1 282 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 A8MV72 311 aaPredicted RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 H3BMM5 538 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 MCF2LO15068 1137 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 TPD52L2O43399 206 aaKnown RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 ZNF861PO60384 105 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 CELF2O95319 508 aaKnown RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 CAPN3P20807 821 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 HNRNPA2B1P22626 353 aaKnown RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 ALDH3B1P43353 468 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 MTCP1P56278 107 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 STX17P56962 302 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 LINC00315P59091 139 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 ACSM1Q08AH1 577 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 CRY2Q49AN0 593 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 LRRC37A5PQ49AS3 106 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 RILPL1Q5EBL4 403 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 SPOUT1Q5T280 376 aaKnown RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 C6orf163Q5TEZ5 329 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 WDR78Q5VTH9 848 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 ZNF544Q6NX49 715 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 FAM180BQ6P0A1 224 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 GCNT7Q6ZNI0 430 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 C1orf122Q6ZSJ8 110 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 TOM1L2Q6ZVM7 507 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 RFPL4BQ6ZWI9 263 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 Q71RC1 249 aaPredicted RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 C14orf178Q8N769 122 aaPredicted RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 SAMD12Q8N8I0 201 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 XXYLT1Q8NBI6 393 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 GANCQ8TET4 914 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 SRSF12Q8WXF0 261 aaKnown RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 SPSB1Q96BD6 273 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 CDHR1Q96JP9 859 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 SPATA33Q96N06 139 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 CDX2Q99626 313 aaPredicted RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 ZNF184Q99676 751 aaPredicted RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 CCM2Q9BSQ5 444 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 ALKBH7Q9BT30 221 aaPredicted RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 CUEDC2Q9H467 287 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 IMPAD1Q9NX62 359 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 FBXO7Q9Y3I1 522 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 SCN4AP35499 1836 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 GAKO14976 1311 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 CCNB3Q8WWL7 1395 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 CASKIN1Q8WXD9 1431 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 FLNBO75369 2602 aaKnown RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 CCDC18Q5T9S5 1454 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 ANKRD11Q6UB99 2663 aaPredicted RBP1.3□□□□□ -2.2
LRCH3-209ENST00000452660 CHD6Q8TD26 2715 aa1.3□□□□□ -2.2
LRCH3-209ENST00000452660 C4AP0C0L4 1744 aa1.29□□□□□ -2.2
LRCH3-209ENST00000452660 C4BP0C0L5 1744 aa1.29□□□□□ -2.2
LRCH3-209ENST00000452660 LTN1O94822 1766 aa1.29□□□□□ -2.2
LRCH3-209ENST00000452660 ZSWIM8A7E2V4 1837 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms