RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 RADILQ96JH8 1075 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 PDGFDQ9GZP0 370 aaPredicted RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 ITSN1Q15811 1721 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 LRRTM2O43300 516 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 CERS1P27544 350 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 TAP2Q03519 686 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 PRSS36Q5K4E3 855 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 CEP68Q76N32 757 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 KLBQ86Z14 1044 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 CRYGNQ8WXF5 182 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 B3GNT4Q9C0J1 378 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 RNF167Q9H6Y7 350 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 ARHGEF17Q96PE2 2063 aaPredicted RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 CLDN11O75508 207 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 AP1S2P56377 157 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 C19orf57Q0VDD7 668 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 PTPRCAPQ14761 206 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 SORCS1Q8WY21 1168 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 A0A0G2JMP0 313 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 PRKCGP05129 697 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 APEX1P27695 318 aaKnown RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 RGS8P57771 180 aaPredicted RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 HSPB3Q12988 150 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 PRAMEF13Q5VWM6 474 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 FAM124AQ86V42 546 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 FUNDC1Q8IVP5 155 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 NXPE1Q8N323 547 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 OR4M2Q8NGB6 313 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 GSKIPQ9P0R6 139 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 PEX14O75381 377 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 GSRP00390 522 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 NUDT7P0C024 238 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 KDM4DQ6B0I6 523 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 ARMC6Q6NXE6 501 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 LINGO4Q6UY18 593 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 PROKR2Q8NFJ6 384 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 REEP4Q9H6H4 257 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 F5H5P2 479 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 OR7A17O14581 309 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 FARS2O95363 451 aaKnown RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 UBBP0CG47 229 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 UBCP0CG48 685 aaKnown RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 ACPPP15309 386 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 ST8SIA6P61647 398 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 RPS27AP62979 156 aaKnown RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 UBA52P62987 128 aaKnown RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 PLD1Q13393 1074 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 ZNF627Q7L945 461 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 TMC8Q8IU68 726 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 MARC2Q969Z3 335 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 NDRG4Q9ULP0 352 aaKnown RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 PCDHGC4Q9Y5F7 938 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 CLDN22Q8N7P3 220 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 C12orf57Q99622 126 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 TRIP11Q15643 1979 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 MUSKO15146 869 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 MSCO60682 206 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 CSN2P05814 226 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 TGFBR1P36897 503 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 GPLD1P80108 840 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 ZNF362Q5T0B9 420 aaPredicted RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 CLRN3Q8NCR9 226 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 SLC25A46Q96AG3 418 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 CD244Q9BZW8 370 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 TREHO43280 583 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 CRYZQ08257 329 aaKnown RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 CPZQ66K79 652 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 GPR139Q6DWJ6 353 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 PGAP1Q75T13 922 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 OR13C4Q8NGS5 318 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 ST6GAL2Q96JF0 529 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 ZNF583Q96ND8 569 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 SORBS1Q9BX66 1292 aaKnown RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 NIT2Q9NQR4 276 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 KLK4Q9Y5K2 254 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 FABP1P07148 127 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 LAMP2P13473 410 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 EQTNQ9NQ60 294 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 CHD5Q8TDI0 1954 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 PTH2RP49190 550 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 OR6K2Q8NGY2 324 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 ZNF419Q96HQ0 510 aaPredicted RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 SCGB3A2Q96PL1 93 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 TXNL4BQ9NX01 149 aaKnown RBP7.54□□□□□ -1.2
SMG1-202ENST00000446231 SLC22A14Q9Y267 594 aa7.54□□□□□ -1.2
SMG1-202ENST00000446231 WASH4PA8MWX3 477 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 PRAMEF11O60813 436 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 SCGNO76038 276 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 OR6A2O95222 327 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 ADH6P28332 368 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 NBPF12Q5TAG4 269 aaPredicted RBP7.53□□□□□ -1.2
SMG1-202ENST00000446231 NAGSQ8N159 534 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 SLC44A3Q8N4M1 653 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 ESX1Q8N693 406 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 LIN7BQ9HAP6 207 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 SH2B3Q9UQQ2 575 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 TRAPPC4Q9Y296 219 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 LOC105369274A0A096LPK9 316 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 CDK2AP1O14519 115 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 RPN2P04844 631 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms