RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 MAPRE3Q9UPY8 281 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 GPR52Q9Y2T5 361 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 A0A1W2PS29 197 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 A8MVJ9 347 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 H7BY64 318 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 SLC28A2O43868 658 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 SLITRK5O94991 958 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 CDRT1O95170 752 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 ADAP00813 363 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 APOA1P02647 267 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 SERPIND1P05546 499 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 H1F0P07305 194 aaKnown RBP13.49□□□□□ -0.25
ATRIP-204ENST00000412052 ACADLP28330 430 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 CSTF2P33240 577 aaKnown RBP eCLIP13.49□□□□□ -0.25
ATRIP-204ENST00000412052 HTR3AP46098 478 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 DEFA1P59665 94 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 DEFA3P59666 94 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 ERVFC1P60507 584 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 RACK1P63244 317 aaKnown RBP13.49□□□□□ -0.25
ATRIP-204ENST00000412052 ZNF750Q32MQ0 723 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 SLX4IPQ5VYV7 408 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 ACSM5Q6NUN0 579 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 FAM129CQ86XR2 697 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 XAGE5Q8WWM1 108 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 KLHL6Q8WZ60 621 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 ARRDC3Q96B67 414 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 EFHD2Q96C19 240 aaPredicted RBP13.49□□□□□ -0.25
ATRIP-204ENST00000412052 TMEM80Q96HE8 168 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 PRAP1Q96NZ9 151 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 PLA2G12AQ9BZM1 189 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 ANKRA2Q9H9E1 313 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 SZT2Q5T011 3432 aa13.49□□□□□ -0.25
ATRIP-204ENST00000412052 CAPN5O15484 640 aaPredicted RBP13.48□□□□□ -0.25
ATRIP-204ENST00000412052 PDPK1O15530 556 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 SEMA3DO95025 777 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 C6P13671 934 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 CSF2RAP15509 400 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 DDCP20711 480 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 BSGP35613 385 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 NNMTP40261 264 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 TIMM50Q3ZCQ8 353 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 PODNL1Q6PEZ8 512 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 PHC2Q8IXK0 858 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 NUS1Q96E22 293 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 ZFYVE19Q96K21 471 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 TREX2Q9BQ50 279 aaPredicted RBP13.48□□□□□ -0.25
ATRIP-204ENST00000412052 ABCB9Q9NP78 766 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 DDX28Q9NUL7 540 aaKnown RBP13.48□□□□□ -0.25
ATRIP-204ENST00000412052 SPATA7Q9P0W8 599 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 SEC14L3Q9UDX4 400 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 WBP11Q9Y2W2 641 aaKnown RBP13.48□□□□□ -0.25
ATRIP-204ENST00000412052 FRS3O43559 492 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 EPPINO95925 133 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 PRKAG1P54619 331 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 MAP4K2Q12851 820 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 NOGQ13253 232 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 ILKQ13418 452 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 ELOAQ14241 798 aaKnown RBP13.48□□□□□ -0.25
ATRIP-204ENST00000412052 ATAT1Q5SQI0 421 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 PLPP4Q5VZY2 271 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 C12orf73Q69YU5 71 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 CASP12Q6UXS9 341 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 UBQLNLQ8IYU4 475 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 PIK3R3Q92569 461 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 CAPNS2Q96L46 248 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 TOR4AQ9NXH8 423 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 NFKBIL1Q9UBC1 381 aaPredicted RBP13.48□□□□□ -0.25
ATRIP-204ENST00000412052 A4GNTQ9UNA3 340 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 DNMT3AQ9Y6K1 912 aaPredicted RBP13.48□□□□□ -0.25
ATRIP-204ENST00000412052 PRRT4C9JH25 899 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 LATO43561 262 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 SNRNP200O75643 2136 aaKnown RBP13.48□□□□□ -0.25
ATRIP-204ENST00000412052 CSF2P04141 144 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 RHOP08100 348 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 SRPRAP08240 638 aaKnown RBP13.48□□□□□ -0.25
ATRIP-204ENST00000412052 MSL3P1P0C860 447 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 IL7P13232 177 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 HOXB3P14651 431 aaPredicted RBP13.48□□□□□ -0.25
ATRIP-204ENST00000412052 MMP11P24347 488 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 HOXC5Q00444 222 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 HNRNPA0Q13151 305 aaKnown RBP13.48□□□□□ -0.25
ATRIP-204ENST00000412052 ZNF77Q15935 545 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 KHDRBS2Q5VWX1 349 aaKnown RBP13.48□□□□□ -0.25
ATRIP-204ENST00000412052 TMPRSS11AQ6ZMR5 421 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 ZER1Q7Z7L7 766 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 IQCHQ86VS3 1027 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 SLAIN1Q8ND83 568 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 TM9SF2Q99805 663 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 MIXL1Q9H2W2 232 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 EGLN3Q9H6Z9 239 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 PLSCR3Q9NRY6 295 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 TRPC4Q9UBN4 977 aa13.48□□□□□ -0.25
ATRIP-204ENST00000412052 COL4A3Q01955 1670 aa13.47□□□□□ -0.25
ATRIP-204ENST00000412052 KIF26AQ9ULI4 1882 aaPredicted RBP13.47□□□□□ -0.25
ATRIP-204ENST00000412052 SNX4O95219 450 aa13.47□□□□□ -0.25
ATRIP-204ENST00000412052 PAPLNO95428 1278 aa13.47□□□□□ -0.25
ATRIP-204ENST00000412052 PSMA1P25786 263 aaKnown RBP13.47□□□□□ -0.25
ATRIP-204ENST00000412052 WDR5P61964 334 aaKnown RBP13.47□□□□□ -0.25
ATRIP-204ENST00000412052 SNRPGP62308 76 aaKnown RBP13.47□□□□□ -0.25
ATRIP-204ENST00000412052 PSPHP78330 225 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms