RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 SPIN1Q9Y657 262 aaPredicted RBP7.84□□□□□ -1.15
PTPRD-204ENST00000397606 C17orf105B2RV13 164 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 SLITRK5O94991 958 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 PAPLNO95428 1278 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 HSMCR30P0CW71 290 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 PLGLB1Q02325 96 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 KIAA1614Q5VZ46 1190 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 TYW3Q6IPR3 259 aaKnown RBP7.84□□□□□ -1.15
PTPRD-204ENST00000397606 ABHD17CQ6PCB6 329 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 RBM44Q6ZP01 1051 aaKnown RBP7.84□□□□□ -1.15
PTPRD-204ENST00000397606 NUP54Q7Z3B4 507 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 KMT5CQ86Y97 462 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 METTL25Q8N6Q8 603 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 RORBQ92753 470 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 FKBP10Q96AY3 582 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 PHF21AQ96BD5 680 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 DUSP15Q9H1R2 295 aaPredicted RBP7.84□□□□□ -1.15
PTPRD-204ENST00000397606 CLK4Q9HAZ1 481 aaKnown RBP7.84□□□□□ -1.15
PTPRD-204ENST00000397606 PRDM6Q9NQX0 595 aa7.84□□□□□ -1.15
PTPRD-204ENST00000397606 GAPDHSO14556 408 aaPredicted RBP7.84□□□□□ -1.16
PTPRD-204ENST00000397606 MGRN1O60291 552 aa7.84□□□□□ -1.16
PTPRD-204ENST00000397606 CYP4B1P13584 511 aa7.84□□□□□ -1.16
PTPRD-204ENST00000397606 HSD17B1P14061 328 aa7.84□□□□□ -1.16
PTPRD-204ENST00000397606 DCDP81605 110 aaKnown RBP7.84□□□□□ -1.16
PTPRD-204ENST00000397606 TNFRSF17Q02223 184 aa7.84□□□□□ -1.16
PTPRD-204ENST00000397606 GANABQ14697 944 aaKnown RBP7.84□□□□□ -1.16
PTPRD-204ENST00000397606 SYT16Q17RD7 645 aa7.84□□□□□ -1.16
PTPRD-204ENST00000397606 BPIFB6Q8NFQ5 453 aa7.84□□□□□ -1.16
PTPRD-204ENST00000397606 BAHD1Q8TBE0 780 aaPredicted RBP7.84□□□□□ -1.16
PTPRD-204ENST00000397606 WDR60Q8WVS4 1066 aa7.84□□□□□ -1.16
PTPRD-204ENST00000397606 MYDGFQ969H8 173 aa7.84□□□□□ -1.16
PTPRD-204ENST00000397606 HOXD1Q9GZZ0 328 aa7.84□□□□□ -1.16
PTPRD-204ENST00000397606 GP1BBP13224 206 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 OR1D4P47884 311 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 CLCN2P51788 898 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 RPS26P62854 115 aaKnown RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 TARDBPQ13148 414 aaKnown RBP eCLIP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 AGERQ15109 404 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 ANGPT1Q15389 498 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 ZSWIM7Q19AV6 140 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 GALNT5Q7Z7M9 940 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 OR9A2Q8NGT5 310 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 OR51Q1Q8NH59 317 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 CIDECQ96AQ7 238 aaPredicted RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 OSBPL10Q9BXB5 764 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 PNPLA3Q9NST1 481 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 TBC1D23Q9NUY8 699 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 PCDHA9Q9Y5H5 950 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 ANTXRLA6NF34 631 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 NUDT21O43809 227 aaKnown RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 CPNE3O75131 537 aaKnown RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 AIFM1O95831 613 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 CSTAP01040 98 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 ALDOCP09972 364 aaKnown RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 ETFAP13804 333 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 CPMP14384 443 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 GSTM3P21266 225 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 PSMA3P25788 255 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 PSMB9P28065 219 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 MC3RP41968 323 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 RPS6KA3P51812 740 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 ZNF41P51814 821 aaPredicted RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 FOLH1Q04609 750 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 BNIP3Q12983 259 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 SNTA1Q13424 505 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 NNATQ16517 81 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 LUZP2Q86TE4 346 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 JAZF1Q86VZ6 243 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 LAS2Q8IYD9 372 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 GOLM1Q8NBJ4 401 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 ABHD11Q8NFV4 315 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 OR10G2Q8NGC3 310 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 TMEM234Q8WY98 164 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 GTPBP3Q969Y2 492 aaKnown RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 DOHHQ9BU89 302 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 NPLQ9BXD5 320 aaPredicted RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 POLR2J3Q9H1A7 115 aaKnown RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 LRRN3Q9H3W5 708 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 CCNB1IP1Q9NPC3 277 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 A0A0G2JPF8 293 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 IRGMA1A4Y4 181 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 RIIAD1A6NNX1 92 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 HNRNPCL3B7ZW38 293 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 MPZL2O60487 215 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 LDB3O75112 727 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 HNRNPCL4P0DMR1 293 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 IMPDH2P12268 514 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 IHHQ14623 411 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 RGNQ15493 299 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 SNAPC1Q16533 368 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 LIN52Q52LA3 116 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 PAGE3Q5JUK9 113 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 LGI4Q8N135 537 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 OR2A1Q8NGT9 310 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 THAP3Q8WTV1 239 aaPredicted RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 CHTF18Q8WVB6 975 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 MAELQ96JY0 434 aaKnown RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 INPP5KQ9BT40 448 aa7.83□□□□□ -1.16
PTPRD-204ENST00000397606 TCEAL2Q9H3H9 227 aaPredicted RBP7.83□□□□□ -1.16
PTPRD-204ENST00000397606 RNF215Q9Y6U7 377 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms