RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 DECR1Q16698 335 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 C3orf38Q5JPI3 329 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 ZNF648Q5T619 568 aaPredicted RBP5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 SLC48A1Q6P1K1 146 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 CMIPQ8IY22 773 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 ADGRF3Q8IZF5 1079 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 ARHGEF39Q8N4T4 335 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 FAM46DQ8NEK8 389 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 OR2A1Q8NGT9 310 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 FGF13Q92913 245 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 RUBCNLQ9H714 662 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 SPASTQ9UBP0 616 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 CD84Q9UIB8 345 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 PILRAQ9UKJ1 303 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 RNF6Q9Y252 685 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 ERGIC3Q9Y282 383 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 TBC1D3KA0A087X1G2 549 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 TBC1D3BA6NDS4 549 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 TBC1D3FA6NER0 549 aaPredicted RBP5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 ANKDD1BA6NHY2 528 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 OR2AG2A6NM03 316 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 TMX2-CTNND1H3BSU7 103 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 PROM1O43490 865 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 OR5F1O95221 314 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 ATE1O95260 518 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 SEC13P55735 322 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 CDC42P60953 191 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 IL5RAQ01344 420 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 IRF4Q15306 451 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 GTDC1Q4AE62 458 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 EIPR1Q53HC9 387 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 TBC1D3GQ6DHY5 549 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 SDE2Q6IQ49 451 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 CEP68Q76N32 757 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 TMPRSS11BQ86T26 416 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 IQCHQ86VS3 1027 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 KRT73Q86Y46 540 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 OR10G2Q8NGC3 310 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 ZNF681Q96N22 645 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 CCDC32Q9BV29 185 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 SMG9Q9H0W8 520 aaKnown RBP5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 OR2AG1Q9H205 316 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 FANCEQ9HB96 536 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 AMBNQ9NP70 447 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 PRDM7Q9NQW5 492 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 POT1Q9NUX5 634 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 ACTR10Q9NZ32 417 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 ZFR2Q9UPR6 939 aaKnown RBP5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 BAIAP2Q9UQB8 552 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 EXOGQ9Y2C4 368 aaKnown RBP5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 BTBD3Q9Y2F9 522 aa5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 SAMHD1Q9Y3Z3 626 aaKnown RBP5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 TNRC6BQ9UPQ9 1833 aaKnown RBP5.69□□□□□ -1.5
RAPGEF4-203ENST00000397087 TMEM129A0AVI4 362 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 KDM4EB2RXH2 506 aaPredicted RBP5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 K7EQS6 105 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 EMC8O43402 210 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 LZTS3O60299 673 aaPredicted RBP5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 BCL10O95999 233 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 TP53P04637 393 aaPredicted RBP5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 HLA-EP13747 358 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 MATN1P21941 496 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 FUT4P22083 530 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 PCSK6P29122 969 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 PDHA2P29803 388 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 PPP2R1BP30154 601 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 NTSP30990 170 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 C2orf80Q0P641 193 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 RAPSNQ13702 412 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 CLCA4Q14CN2 919 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 ANKDD1AQ495B1 522 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 FHL5Q5TD97 284 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 ABHD17CQ6PCB6 329 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 USP53Q70EK8 1073 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 CDH24Q86UP0 819 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 CFAP206Q8IYR0 622 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 HS3ST5Q8IZT8 346 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 NAGSQ8N159 534 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 C2orf73Q8N5S3 287 aaPredicted RBP5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 ANKRD53Q8N9V6 530 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 SMYD1Q8NB12 490 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 PSD4Q8NDX1 1056 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 OR6Q1Q8NGQ2 317 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 SLC2A12Q8TD20 617 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 CYB5D2Q8WUJ1 264 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 RORBQ92753 470 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 MS4A6EQ96DS6 147 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 AMDHD1Q96NU7 426 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 MYOCQ99972 504 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 FUNDC2Q9BWH2 189 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 RIBC2Q9H4K1 309 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 CPNE5Q9HCH3 593 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 KRCC1Q9NPI7 259 aaPredicted RBP5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 SEMA5BQ9P283 1151 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 KIF17Q9P2E2 1029 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 CDC14AQ9UNH5 594 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 DIMT1Q9UNQ2 313 aaKnown RBP5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 C2orf92A0A1B0GVN3 265 aa5.68□□□□□ -1.5
RAPGEF4-203ENST00000397087 TMEM247A6NEH6 219 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms