RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 CSNK2BP67870 215 aa24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 MRPS21P82921 87 aaKnown RBP24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 DUSP2Q05923 314 aa24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 GPR19Q15760 415 aa24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 TJAP1Q5JTD0 557 aa24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 PAQR7Q86WK9 346 aa24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 TRIM69Q86WT6 500 aa24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 TAGAPQ8N103 731 aa24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 SVOPQ8N4V2 548 aa24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 AQP11Q8NBQ7 271 aa24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 SUN3Q8TAQ9 357 aa24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 CNRIP1Q96F85 164 aaPredicted RBP24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 SIGLEC11Q96RL6 698 aa24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 ZNF607Q96SK3 696 aa24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 TMEM168Q9H0V1 697 aa24.2■■□□□ 1.46
SMARCD3-203ENST00000392811 ZBTB11O95625 1053 aaPredicted RBP24.19■■□□□ 1.46
SMARCD3-203ENST00000392811 APBB3O95704 486 aa24.19■■□□□ 1.46
SMARCD3-203ENST00000392811 ACTR1BP42025 376 aa24.19■■□□□ 1.46
SMARCD3-203ENST00000392811 IDH2P48735 452 aaKnown RBP24.19■■□□□ 1.46
SMARCD3-203ENST00000392811 ACTR1AP61163 376 aa24.19■■□□□ 1.46
SMARCD3-203ENST00000392811 TFF2Q03403 129 aa24.19■■□□□ 1.46
SMARCD3-203ENST00000392811 COLEC12Q5KU26 742 aa24.19■■□□□ 1.46
SMARCD3-203ENST00000392811 SRFBP1Q8NEF9 429 aaKnown RBP24.19■■□□□ 1.46
SMARCD3-203ENST00000392811 RHOXF1Q8NHV9 184 aa24.19■■□□□ 1.46
SMARCD3-203ENST00000392811 ACOT13Q9NPJ3 140 aa24.19■■□□□ 1.46
SMARCD3-203ENST00000392811 PCOLCE2Q9UKZ9 415 aa24.19■■□□□ 1.46
SMARCD3-203ENST00000392811 GOLGA4Q13439 2230 aaKnown RBP24.19■■□□□ 1.46
SMARCD3-203ENST00000392811 ARRDC5A6NEK1 342 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 SEMA7AO75326 666 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 ASGR2P07307 311 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 HNRNPA2B1P22626 353 aaKnown RBP24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 SPCS2Q15005 226 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 CTF1Q16619 201 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 SYT6Q5T7P8 510 aaPredicted RBP24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 CCDC103Q8IW40 242 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 CCDC116Q8IYX3 515 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 OTUB1Q96FW1 271 aaPredicted RBP24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 MSLNLQ96KJ4 702 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 ZNF354BQ96LW1 612 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 SRMSQ9H3Y6 488 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 NMNAT1Q9HAN9 279 aaPredicted RBP24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 SEMA3GQ9NS98 782 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 SEC14L3Q9UDX4 400 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 CES1P1Q9UKY3 287 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 TRBV4-1A0A0J9YWV2 114 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 FAM227AF5H4B4 570 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 RASGRP1O95267 797 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 GASTP01350 101 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 NR2F1P10589 423 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 TPMTP51580 245 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 PRKAG1P54619 331 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 STXBP1P61764 594 aaKnown RBP24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 MVKQ03426 396 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 ZNF770Q6IQ21 691 aaPredicted RBP24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 TCTN3Q6NUS6 607 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 TMEM64Q6YI46 380 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 RBM45Q8IUH3 476 aaKnown RBP24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 PARP8Q8N3A8 854 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 OR4D11Q8NGI4 311 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 RPLP0P6Q8NHW5 317 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 VANGL1Q8TAA9 524 aaPredicted RBP24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 UTP15Q8TED0 518 aaKnown RBP24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 FCRL4Q96PJ5 515 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 PLGRKTQ9HBL7 147 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 ZNF226Q9NYT6 803 aa24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 GPC6Q9Y625 555 aaPredicted RBP24.18■■□□□ 1.46
SMARCD3-203ENST00000392811 A0A1W2PS29 197 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 ZW10O43264 779 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 C8orf89P0DMQ9 161 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 TSFMP43897 325 aaKnown RBP24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 KHKP50053 298 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 C11orf91Q3C1V1 193 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 SLC48A1Q6P1K1 146 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 VN1R4Q7Z5H5 301 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 WFDC6Q9BQY6 131 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 KCNK12Q9HB15 430 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 PLCXD1Q9NUJ7 323 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 ENTPD4Q9Y227 616 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 NARSO43776 548 aaKnown RBP24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 SERPINB7O75635 380 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 F3P13726 295 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 PSMB9P28065 219 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 FEN1P39748 380 aaKnown RBP24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 KLHL17Q6TDP4 642 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 OLIG3Q7RTU3 272 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 KCT2Q8NC54 265 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 SFXN5Q8TD22 340 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 RASSF5Q8WWW0 418 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 YIPF6Q96EC8 236 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 YIPF4Q9BSR8 244 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 PSORS1C1Q9UIG5 152 aa24.17■■□□□ 1.46
SMARCD3-203ENST00000392811 A6NCN8 305 aa24.16■■□□□ 1.46
SMARCD3-203ENST00000392811 PROM1O43490 865 aa24.16■■□□□ 1.46
SMARCD3-203ENST00000392811 GABARAPO95166 117 aa24.16■■□□□ 1.46
SMARCD3-203ENST00000392811 GABRB1P18505 474 aa24.16■■□□□ 1.46
SMARCD3-203ENST00000392811 PPP2R1BP30154 601 aa24.16■■□□□ 1.46
SMARCD3-203ENST00000392811 BTN3A2P78410 334 aa24.16■■□□□ 1.46
SMARCD3-203ENST00000392811 SFSWAPQ12872 951 aaKnown RBP24.16■■□□□ 1.46
SMARCD3-203ENST00000392811 MLIPQ5VWP3 458 aa24.16■■□□□ 1.46
SMARCD3-203ENST00000392811 DEF8Q6ZN54 512 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms