RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 CD79BP40259 229 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 NSG1P42857 185 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 HMGA2P52926 109 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 LSM11P83369 360 aaKnown RBP eCLIP10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 RTP2Q5QGT7 225 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 GLB1LQ6UWU2 654 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 TPGS1Q6ZTW0 290 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 TAS1R1Q7RTX1 841 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 HUS1BQ8NHY5 278 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 OR4K3Q96R72 315 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 DCLRE1CQ96SD1 692 aaKnown RBP10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 KATNB1Q9BVA0 655 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 RACGAP1Q9H0H5 632 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 ENPP4Q9Y6X5 453 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 DSPPQ9NZW4 1301 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 MGAT4DA6NG13 374 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 RRP8O43159 456 aaKnown RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 BNIP3LO60238 219 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 HPGDSO60760 199 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 MAP2K3P46734 347 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 GATMP50440 423 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 RPS26P62854 115 aaKnown RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 ADGRF1Q5T601 910 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 PXDC1Q5TGL8 231 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 LIX1LQ8IVB5 337 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 TAGAPQ8N103 731 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 GDPD1Q8N9F7 314 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 GEMIN6Q8WXD5 167 aaKnown RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 CCDC120Q96HB5 630 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 USB1Q9BQ65 265 aaKnown RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 PCDHGB7Q9Y5F8 929 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 SPIN1Q9Y657 262 aaPredicted RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 TMEM202A6NGA9 273 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 WASHC1A8K0Z3 465 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 PRKYO43930 277 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 C1QBP02746 253 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 FAM157BP0CG42 384 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 RELQ04864 619 aaPredicted RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 BCL2L1Q07817 233 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 RBBP4Q09028 425 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 TARDBPQ13148 414 aaKnown RBP eCLIP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 INSL4Q14641 139 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 ZNF628Q5EBL2 1059 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 LCN1P1Q5VSP4 162 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 PRSS55Q6UWB4 352 aaPredicted RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 GDPGP1Q6ZNW5 385 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 THOC6Q86W42 341 aaKnown RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 MEX3DQ86XN8 651 aaKnown RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 Q8N402 240 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 TTLQ8NG68 377 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 TM9SF4Q92544 642 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 WRAP53Q9BUR4 548 aaKnown RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 ZNF282Q9UDV7 671 aaPredicted RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 KLHL21Q9UJP4 597 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 CASP8AP2Q9UKL3 1982 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 NOS1APO75052 506 aaPredicted RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 CBSLP0DN79 551 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 SLC2A2P11168 524 aaPredicted RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 NDUFV2P19404 249 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 PTX3P26022 381 aaPredicted RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 PKLRP30613 574 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 CBSP35520 551 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 AGFG1P52594 562 aaKnown RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 MAPK12P53778 367 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 RPS13P62277 151 aaKnown RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 CNIH2Q6PI25 160 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 PLCZ1Q86YW0 608 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 OR52I1Q8NGK6 324 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 PCNPQ8WW12 178 aaKnown RBP10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 GATAD2BQ8WXI9 593 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 LINC01599Q8WXQ3 324 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 C1GALT1C1Q96EU7 318 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 ZDHHC3Q9NYG2 299 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 TVP23BQ9NYZ1 205 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 CORO2BQ9UQ03 480 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 OR51B4Q9Y5P0 310 aa10.93□□□□□ -0.66
TM9SF2-201ENST00000376387 ZNF840PA6NDX5 716 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 MYL12BO14950 172 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 ST8SIA5O15466 376 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 ARHGEF9O43307 516 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 TLX2O43763 284 aaPredicted RBP10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 MPZL2O60487 215 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 CSNK1DP48730 415 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 ALDH9A1P49189 494 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 FOXK1P85037 733 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 FCHO2Q0JRZ9 810 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 MLLT11Q13015 90 aaPredicted RBP10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 NCF4Q15080 339 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 TOR2AQ5JU69 321 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 DDI2Q5TDH0 399 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 CHST9Q7L1S5 443 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 SHFQ7M4L6 423 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 TMEM145Q8NBT3 493 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 METTL2AQ96IZ6 378 aaKnown RBP10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 MAPRE3Q9UPY8 281 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 PLXND1Q9Y4D7 1925 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 TRBV23OR9-2A0A075B6M9 112 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 SERTM1A2A2V5 107 aa10.92□□□□□ -0.66
TM9SF2-201ENST00000376387 A8MVJ9 347 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms