RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 MAGEL2Q9UJ55 1249 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 OAS3Q9Y6K5 1087 aaKnown RBP8.43□□□□□ -1.06
ATG4A-203ENST00000372232 SHROOM3Q8TF72 1996 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 A0A1B0GV90 55 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 LGALS8O00214 317 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 QSOX1O00391 747 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 PPP6CO00743 305 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 VEGFDO43915 354 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 PLOD3O60568 738 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 SEC22BO75396 215 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 CLEC3AO75596 197 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 SLC35E2BP0CK96 405 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 CKMT1AP12532 417 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 SAT1P21673 171 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 ZNF81P51508 661 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 GPR143P51810 404 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 C21orf58P58505 322 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 SP3Q02447 781 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 CTBP1Q13363 440 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 MAD2L1BPQ15013 274 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-203ENST00000372232 NCF4Q15080 339 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 NKG7Q16617 165 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 C3orf33Q6P1S2 294 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 TMEM107Q6UX40 140 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 KDELC2Q7Z4H8 507 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 DENND6AQ8IWF6 608 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 SLC43A2Q8N370 569 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 LNX2Q8N448 690 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 C12orf45Q8N5I9 185 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-203ENST00000372232 LRRC17Q8N6Y2 441 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 OR5K1Q8NHB7 308 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 DIO2Q92813 273 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 FAM193BQ96PV7 902 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-203ENST00000372232 PDCD10Q9BUL8 212 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 ZYG11BQ9C0D3 744 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 NRSN2Q9GZP1 204 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 ANKRD19PQ9H560 264 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 TASP1Q9H6P5 420 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 CARS2Q9HA77 564 aaKnown RBP8.43□□□□□ -1.06
ATG4A-203ENST00000372232 TREX1Q9NSU2 369 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 GTSE1Q9NYZ3 720 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 SLC2A6Q9UGQ3 507 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 EVLQ9UI08 416 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-203ENST00000372232 SLC6A5Q9Y345 797 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 SAMHD1Q9Y3Z3 626 aaKnown RBP8.43□□□□□ -1.06
ATG4A-203ENST00000372232 ORC6Q9Y5N6 252 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 PATJQ8NI35 1801 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 TTC3P53804 2025 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SULT1C2O00338 296 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 PDCD5O14737 125 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 TBX18O95935 607 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 C9P02748 559 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 OR56A5P0C7T3 313 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 COX5BP10606 129 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 PRKAR1AP10644 381 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 APEHP13798 732 aaKnown RBP8.42□□□□□ -1.06
ATG4A-203ENST00000372232 LHCGRP22888 699 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 CHRNA4P43681 627 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 TGM4P49221 684 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 RGS6P49758 472 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 HNMTP50135 292 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 PGGT1BP53609 377 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 WNT3AP56704 352 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 ACTR1AP61163 376 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 C2orf80Q0P641 193 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 EFEMP1Q12805 493 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 LRRC32Q14392 662 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 FCN2Q15485 313 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SMN1Q16637 294 aaKnown RBP8.42□□□□□ -1.06
ATG4A-203ENST00000372232 PFKFB4Q16877 469 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 TMEM44Q2T9K0 475 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 CTXN3Q4LDR2 81 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 MS4A13Q5J8X5 152 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 C19orf48Q6RUI8 117 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SPESP1Q6UW49 350 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 AHSA2Q719I0 299 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 LARP4Q71RC2 724 aaKnown RBP eCLIP8.42□□□□□ -1.06
ATG4A-203ENST00000372232 EIF3MQ7L2H7 374 aaKnown RBP8.42□□□□□ -1.06
ATG4A-203ENST00000372232 PIWIL4Q7Z3Z4 852 aaKnown RBP8.42□□□□□ -1.06
ATG4A-203ENST00000372232 ZER1Q7Z7L7 766 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 GLCCI1Q86VQ1 547 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 MFSD6LQ8IWD5 586 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 UBE2J2Q8N2K1 259 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 TTC9BQ8N6N2 239 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 LPCAT1Q8NF37 534 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SGCZQ96LD1 299 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 CXorf58Q96LI9 332 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 KCNA7Q96RP8 456 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SLC29A3Q9BZD2 475 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 QRSL1Q9H0R6 528 aaKnown RBP8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SLC25A51Q9H1U9 297 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 ATXN3LQ9H3M9 355 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 SEBOXQ9HB31 216 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-203ENST00000372232 GKN1Q9NS71 199 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 AASSQ9UDR5 926 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 CGGBP1Q9UFW8 167 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-203ENST00000372232 PHF11Q9UIL8 331 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 CMAHPQ9Y471 501 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 IGLV3-10A0A075B6K4 115 aa8.42□□□□□ -1.06
ATG4A-203ENST00000372232 TRAV19A0A0A6YYK7 116 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms