RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 KCNK12Q9HB15 430 aa18.77■□□□□ 0.6
LMO4-202ENST00000370544 L7N2F9 121 aa18.77■□□□□ 0.59
LMO4-202ENST00000370544 PENKP01210 267 aaPredicted RBP18.77■□□□□ 0.59
LMO4-202ENST00000370544 IFNA21P01568 189 aa18.77■□□□□ 0.59
LMO4-202ENST00000370544 LAMP1P11279 417 aa18.77■□□□□ 0.59
LMO4-202ENST00000370544 CEBPBP17676 345 aa18.77■□□□□ 0.59
LMO4-202ENST00000370544 GCGRP47871 477 aa18.77■□□□□ 0.59
LMO4-202ENST00000370544 WDR5P61964 334 aaKnown RBP18.77■□□□□ 0.59
LMO4-202ENST00000370544 VAMP2P63027 116 aa18.77■□□□□ 0.59
LMO4-202ENST00000370544 EIF5AP63241 154 aaKnown RBP18.77■□□□□ 0.59
LMO4-202ENST00000370544 ZNF283Q8N7M2 679 aa18.77■□□□□ 0.59
LMO4-202ENST00000370544 GJD2Q9UKL4 321 aa18.77■□□□□ 0.59
LMO4-202ENST00000370544 NUP98P52948 1817 aa18.77■□□□□ 0.59
LMO4-202ENST00000370544 MYH11P35749 1972 aa18.77■□□□□ 0.59
LMO4-202ENST00000370544 KANTRA0A1W2PQU2 76 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 ZNF217O75362 1048 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 THEGLP0DJG4 465 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 ACTC1P68032 377 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 ACTA1P68133 377 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 PIGFQ07326 219 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 LRIF1Q5T3J3 769 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 FIP1L1Q6UN15 594 aaKnown RBP18.76■□□□□ 0.59
LMO4-202ENST00000370544 TPSD1Q9BZJ3 242 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 ENAMQ9NRM1 1142 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 A0A0U1RQS6 177 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 DLGAP1O14490 977 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 SMAD6O43541 496 aaKnown RBP18.76■□□□□ 0.59
LMO4-202ENST00000370544 CDC40O60508 579 aaKnown RBP eCLIP18.76■□□□□ 0.59
LMO4-202ENST00000370544 SYNGR4O95473 234 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 HSD17B1P14061 328 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 S1PR1P21453 382 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 TMBIM6P55061 237 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 SHC2P98077 582 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 CDKL1Q00532 357 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 LCN8Q6JVE9 175 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 FIGNL1Q6PIW4 674 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 TTLL10Q6ZVT0 673 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 TAS1R1Q7RTX1 841 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 OR52N2Q8NGI0 321 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 NPLQ9BXD5 320 aaPredicted RBP18.76■□□□□ 0.59
LMO4-202ENST00000370544 SCML1Q9UN30 329 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 MYH8P13535 1937 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 NPIPA2E9PIF3 369 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 NPIPA3F8WFD2 350 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 LAMTOR5O43504 91 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 KDM4BO94953 1096 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 CELP19835 753 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 HNRNPKP61978 463 aaKnown RBP eCLIP18.76■□□□□ 0.59
LMO4-202ENST00000370544 SIM1P81133 766 aaPredicted RBP18.76■□□□□ 0.59
LMO4-202ENST00000370544 NPRL3Q12980 569 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 OR8K3Q8NH51 312 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 ECHDC3Q96DC8 303 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 CDCA3Q99618 268 aaPredicted RBP18.76■□□□□ 0.59
LMO4-202ENST00000370544 SLC19A2O60779 497 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 APOL3O95236 402 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 LIPKQ5VXJ0 399 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 LETMD1Q6P1Q0 360 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 OR8J1Q8NGP2 316 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 SLC7A6OSQ96CW6 309 aaPredicted RBP18.76■□□□□ 0.59
LMO4-202ENST00000370544 CCDC115Q96NT0 180 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 TUBA1CQ9BQE3 449 aa18.76■□□□□ 0.59
LMO4-202ENST00000370544 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.76■□□□□ 0.599e-8■■■■□ 26
LMO4-202ENST00000370544 OR6C70A6NIJ9 312 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 GNG2P59768 71 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 CRYZQ08257 329 aaKnown RBP18.75■□□□□ 0.59
LMO4-202ENST00000370544 PIGGQ5H8A4 983 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 TMEM236Q5W0B7 351 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 KCTD18Q6PI47 426 aaPredicted RBP18.75■□□□□ 0.59
LMO4-202ENST00000370544 XKR5Q6UX68 686 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 TMEM19Q96HH6 336 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 VSTM5A8MXK1 200 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 SEMA3DO95025 777 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 S100A6P06703 90 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 ARSAP15289 507 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 IL1RNP18510 177 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 PGCP20142 388 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 SOX2P48431 317 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 TRAM1Q15629 374 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 USP53Q70EK8 1073 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 OR5AR1Q8NGP9 310 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 SGTBQ96EQ0 304 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 PEX11GQ96HA9 241 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 SECISBP2Q96T21 854 aaKnown RBP18.75■□□□□ 0.59
LMO4-202ENST00000370544 BAIAP2Q9UQB8 552 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 SOCS2O14508 198 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 CLCN2P51788 898 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 HK3P52790 923 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 CD83Q01151 205 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 GAS6Q14393 721 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 SPIN3Q5JUX0 258 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 CPXM2Q8N436 756 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 FOXJ1Q92949 421 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 TMEM41AQ96HV5 264 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 GSTO2Q9H4Y5 243 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 FAM118AQ9NWS6 357 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 ADAMTSL3P82987 1691 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 NAA10P41227 235 aaPredicted RBP18.75■□□□□ 0.59
LMO4-202ENST00000370544 DEFB103AP81534 67 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 RAB41Q5JT25 222 aa18.75■□□□□ 0.59
LMO4-202ENST00000370544 DPPA4Q7L190 304 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms