RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZBED5Q49AG3 693 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 TTLL10Q6ZVT0 673 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 PPP1R35Q8TAP8 253 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 SGIP1Q9BQI5 828 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 TPT1P8Q9HAU6 139 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 TM9SF3Q9HD45 589 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 NGBQ9NPG2 151 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 IL20RAQ9UHF4 553 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 SH2B3Q9UQQ2 575 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 RNF215Q9Y6U7 377 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 PARP4Q9UKK3 1724 aaKnown RBP5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF850A8MQ14 1090 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ITM2AO43736 263 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 MAFKO60675 156 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 PIGRP01833 764 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 CDK4P11802 303 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 AQP4P55087 323 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 TLE3Q04726 772 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 TMEM201Q5SNT2 666 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 LIPJQ5W064 366 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 KLHDC10Q6PID8 442 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 UGT2A3Q6UWM9 527 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 LARP4Q71RC2 724 aaKnown RBP eCLIP5.31□□□□□ -1.56
PTPRD-202ENST00000356435 MAMDC2Q7Z304 686 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-202ENST00000356435 ARL14Q8N4G2 192 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 FCAMRQ8WWV6 532 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 SPTSSAQ969W0 71 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 FAM46BQ96A09 425 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 REEP4Q9H6H4 257 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 CREBZFQ9NS37 354 aa5.31□□□□□ -1.56
PTPRD-202ENST00000356435 MDFIC2A0A1B0GVS7 189 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 VILLO15195 856 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CD9P21926 228 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 ERP29P30040 261 aaKnown RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CTHP32929 405 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 BCL2A1Q16548 175 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 PTCHD3Q3KNS1 767 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 ANKRD26P1Q6NSI1 321 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 OR4F6Q8NGB9 312 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CCNL2Q96S94 520 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 DYNLRB1Q9NP97 96 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 LIPT1Q9Y234 373 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 DLGAP4Q9Y2H0 992 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 H7BY64 318 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 SMAD9O15198 467 aaKnown RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CHRM5P08912 532 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 ABOP16442 354 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CD36P16671 472 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 PRKCAP17252 672 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 XRCC1P18887 633 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 PEX2P28328 305 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 NFE2L1Q14494 772 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 LASP1Q14847 261 aaKnown RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 TSTQ16762 297 aaKnown RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 NADK2Q4G0N4 442 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 S100A7AQ86SG5 101 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 GALNT11Q8NCW6 608 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 OR2T33Q8NG76 320 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 SLC25A44Q96H78 314 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 PRAP1Q96NZ9 151 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 NELL2Q99435 816 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 XKR8Q9H6D3 395 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CXorf21Q9HAI6 301 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 DKK3Q9UBP4 350 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CMAHPQ9Y471 501 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 A0A087WUU8 490 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 IGKV6D-41A0A0C4DH26 115 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 TCRBV7S2A1N4TA0A589 114 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 TTC24A2A3L6 582 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 BLACEA4D250 179 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 D6RAR5 112 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 J3KR12 359 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CNOT4O95628 575 aaKnown RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 MMP2P08253 660 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 NTSR1P30989 418 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 HOXA9P31269 272 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 S100A12P80511 92 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 DNASE1L3Q13609 305 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CLCA4Q14CN2 919 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 MFSD13AQ14CX5 517 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 KIAA0907Q7Z7F0 614 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 GATSQ8NAP1 163 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 FAM3CQ92520 227 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 TRIM43Q96BQ3 446 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 LRRC58Q96CX6 371 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 PRR11Q96HE9 360 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 SFXN2Q96NB2 322 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 LPAR4Q99677 370 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 TREX2Q9BQ50 279 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 TUBA1CQ9BQE3 449 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 ADAMTS10Q9H324 1103 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 RNF11Q9Y3C5 154 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 COCHO43405 550 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 ADAMTS4O75173 837 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CH25HO95992 272 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 ETS2P15036 469 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 ATF4P18848 351 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 POU3F2P20265 443 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 TUBA1BP68363 451 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 DSC1Q08554 894 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms