RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 LOC102723532A0A0G2JNH3 316 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TMEM247A6NEH6 219 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF217O75362 1048 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PDE9AO76083 593 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 IFNW1P05000 195 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 NR2F6P10588 404 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PVRP15151 417 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CD247P20963 164 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 MATN1P21941 496 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CALRP27797 417 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 MPIP34949 423 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 NUDT1P36639 197 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RPS6KA3P51812 740 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KCNC4Q03721 635 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 NPRL3Q12980 569 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PMS2P3Q13401 168 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZBED5Q49AG3 693 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 DEFB134Q4QY38 66 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FRMPD2BQ6IN97 320 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TMEM107Q6UX40 140 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PARGQ86W56 976 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF761Q86XN6 746 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OR4N4Q8N0Y3 316 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SETD9Q8NE22 299 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CNIH3Q8TBE1 160 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FBLIM1Q8WUP2 373 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SGCDQ92629 289 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OTUB1Q96FW1 271 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF681Q96N22 645 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PIP5K1AQ99755 562 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZFYVE21Q9BQ24 234 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 GIMAP4Q9NUV9 329 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 EVA1BQ9NVM1 165 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PTTG2Q9NZH5 202 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ANKMY1Q9P2S6 941 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RSL24D1Q9UHA3 163 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 NDRG4Q9ULP0 352 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FAM32AQ9Y421 112 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 GMPPBQ9Y5P6 360 aa13.32□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FAM221BA6H8Z2 402 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 HMGN2P05204 90 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SMIM10L1P0DMW3 83 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CDK5R2Q13319 367 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LASP1Q14847 261 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SUZ12Q15022 739 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 NEDD8Q15843 81 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 EXOC3L2Q2M3D2 409 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 BROXQ5VW32 411 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 BHLHB9Q6PI77 547 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 B3GNT6Q6ZMB0 384 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SLC5A8Q8N695 610 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FAM46DQ8NEK8 389 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 GPR32P1Q8NGA4 272 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OR10G2Q8NGC3 310 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SFXN5Q8TD22 340 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 APOBEC4Q8WW27 367 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SMIM10Q96HG1 83 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF607Q96SK3 696 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SH3GL3Q99963 347 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 YIPF4Q9BSR8 244 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ACER3Q9NUN7 267 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 BLOC1S6Q9UL45 172 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PSME2Q9UL46 239 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 DUSP12Q9UNI6 340 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KLK4Q9Y5K2 254 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF780BQ9Y6R6 833 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 URADA6NGE7 173 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SLC1A7O00341 560 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FHP07954 510 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 NR2F1P10589 423 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RHCEP18577 417 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FUT4P22083 530 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KHKP50053 298 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 BLKP51451 505 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 HHEXQ03014 270 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LSAMPQ13449 338 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FZD5Q13467 585 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 COL9A2Q14055 689 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 GANABQ14697 944 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 UBXN2BQ14CS0 331 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CEBPEQ15744 281 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 MICAQ29983 383 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF605Q86T29 641 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ALDH16A1Q8IZ83 802 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LGI4Q8N135 537 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 DEFB119Q8N690 84 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CAMKVQ8NCB2 501 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OR9A2Q8NGT5 310 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 BAHD1Q8TBE0 780 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KLHL6Q8WZ60 621 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PROX1Q92786 737 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 THAP11Q96EK4 314 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 COL21A1Q96P44 957 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ROGDIQ9GZN7 287 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RLIMQ9NVW2 624 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KCMF1Q9P0J7 381 aa13.31□□□□□ -0.28
CDK5RAP1-202ENST00000346416 H0YGG7 62 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 EIF2S1P05198 315 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 JUNDP17535 347 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CPN2P22792 545 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms