RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 ZNF763Q0D2J5 394 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 MAD2L1BPQ15013 274 aaPredicted RBP8.32□□□□□ -1.08
RTN3-202ENST00000339997 NKPD1Q17RQ9 610 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 FAM110CQ1W6H9 321 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 SPIN4Q56A73 249 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 BEX5Q5H9J7 111 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 PAMR1Q6UXH9 720 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 IL20RBQ6UXL0 311 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 NLGN2Q8NFZ4 835 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 ZNF382Q96SR6 550 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 TBL1XR1Q9BZK7 514 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 COLEC10Q9Y6Z7 277 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 M0R3H8 397 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 IQCF3P0C7M6 154 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 SELPP16109 830 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 GSTM2P28161 218 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 AQP2P41181 271 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 MGAT3Q09327 533 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 COL28A1Q2UY09 1125 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 DEFB134Q4QY38 66 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 TMEM69Q5SWH9 247 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 HES5Q5TA89 166 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 LRFN4Q6PJG9 635 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 KIF18BQ86Y91 864 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 STOML3Q8TAV4 291 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 ZNF285Q96NJ3 590 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 LMF1Q96S06 567 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 OR2B2Q9GZK3 357 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 KCNH6Q9H252 994 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 SMOC2Q9H3U7 446 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 CSNK1G3Q9Y6M4 447 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 SZT2Q5T011 3432 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 TRIM64BA6NI03 449 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 FAM183AA6NL82 134 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 WASH3PC4AMC7 463 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 LRRN3E7EW58 273 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 SOX1O00570 391 aaPredicted RBP8.32□□□□□ -1.08
RTN3-202ENST00000339997 RP2O75695 350 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 CD3GP09693 182 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 DHRS4L1P0CG22 281 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 BMP2P12643 396 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 ZNF20P17024 532 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 CCND3P30281 292 aaPredicted RBP8.32□□□□□ -1.08
RTN3-202ENST00000339997 HCAR3P49019 387 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 ZNF630Q2M218 657 aaPredicted RBP8.32□□□□□ -1.08
RTN3-202ENST00000339997 PLBD1Q6P4A8 553 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 ADGRG5Q8IZF4 528 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 ARNTL2Q8WYA1 636 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 UBE2FQ969M7 185 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 FUBP1Q96AE4 644 aaKnown RBP8.32□□□□□ -1.08
RTN3-202ENST00000339997 RANBP9Q96S59 729 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 MICU1Q9BPX6 476 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 SLC29A3Q9BZD2 475 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 OR8D2Q9GZM6 311 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 RNF32Q9H0A6 362 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 BTBD1Q9H0C5 482 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 LRRN3Q9H3W5 708 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 SIAEQ9HAT2 523 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 TMEM181Q9P2C4 612 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 CROCCQ5TZA2 2017 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 PARP4Q9UKK3 1724 aaKnown RBP8.32□□□□□ -1.08
RTN3-202ENST00000339997 SPTA1P02549 2419 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 PDCD5O14737 125 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 MT-ND5P03915 603 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 HCKP08631 526 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 ZNF616Q08AN1 781 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 TMEM115Q12893 351 aaPredicted RBP8.32□□□□□ -1.08
RTN3-202ENST00000339997 AIMP2Q13155 320 aaKnown RBP8.32□□□□□ -1.08
RTN3-202ENST00000339997 RFTN1Q14699 578 aaPredicted RBP8.32□□□□□ -1.08
RTN3-202ENST00000339997 TBC1D25Q3MII6 688 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 LEXMQ3ZCV2 418 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 FLYWCH1Q4VC44 716 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 ALG10BQ5I7T1 473 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 NKAPLQ5M9Q1 402 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 DUS1LQ6P1R4 473 aaKnown RBP8.32□□□□□ -1.08
RTN3-202ENST00000339997 TPRG1Q6ZUI0 275 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 GPAT4Q86UL3 456 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 ZC3H3Q8IXZ2 948 aaKnown RBP8.32□□□□□ -1.08
RTN3-202ENST00000339997 PIANPQ8IYJ0 282 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 NRSN1Q8IZ57 195 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 ZNF557Q8N988 423 aaPredicted RBP8.32□□□□□ -1.08
RTN3-202ENST00000339997 OR10T2Q8NGX3 314 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 SLC5A11Q8WWX8 675 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 MYLIPQ8WY64 445 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 ACDQ96AP0 544 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 NUS1Q96E22 293 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 ELMOD3Q96FG2 381 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 CMTM7Q96FZ5 175 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 C12orf42Q96LP6 360 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 AIFM2Q9BRQ8 373 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 RANGRFQ9HD47 186 aaPredicted RBP8.32□□□□□ -1.08
RTN3-202ENST00000339997 YIPF1Q9Y548 306 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 COL1A2P08123 1366 aa8.32□□□□□ -1.08
RTN3-202ENST00000339997 B4DGG1 531 aa8.31□□□□□ -1.08
RTN3-202ENST00000339997 ANHXE9PGG2 379 aa8.31□□□□□ -1.08
RTN3-202ENST00000339997 SMLR1H3BR10 107 aa8.31□□□□□ -1.08
RTN3-202ENST00000339997 PRAMEF11O60813 436 aa8.31□□□□□ -1.08
RTN3-202ENST00000339997 RENP00797 406 aa8.31□□□□□ -1.08
RTN3-202ENST00000339997 GYPBP06028 91 aa8.31□□□□□ -1.08
RTN3-202ENST00000339997 SNU13P55769 128 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms