RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 SMCHD1A6NHR9 2005 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 TRBC2A0A5B9 178 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 ANKRD30BLA7E2S9 258 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 BCKDKO14874 412 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 SCO2O43819 266 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 ANXA3P12429 323 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 SELEP16581 610 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 S1PR1P21453 382 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 PSMA1P25786 263 aaKnown RBP7.02□□□□□ -1.29
EPHA3-201ENST00000336596 TSPAN5P62079 268 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 CDK6Q00534 326 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 DMTNQ08495 405 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 KCNJ11Q14654 390 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 MBTPS1Q14703 1052 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 MED22Q15528 200 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 UBAP2Q5T6F2 1119 aaKnown RBP7.02□□□□□ -1.29
EPHA3-201ENST00000336596 C1orf189Q5VU69 101 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 MEDAGQ5VYS4 303 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 GRHL2Q6ISB3 625 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 REEP3Q6NUK4 255 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 TMEM173Q86WV6 379 aaPredicted RBP7.02□□□□□ -1.29
EPHA3-201ENST00000336596 OR7A2PQ8NGA2 310 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 PNPT1Q8TCS8 783 aaKnown RBP7.02□□□□□ -1.29
EPHA3-201ENST00000336596 COG8Q96MW5 612 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 COL21A1Q96P44 957 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 HCAR1Q9BXC0 346 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 LRRC3Q9BY71 257 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 EHD3Q9NZN3 535 aa7.02□□□□□ -1.29
EPHA3-201ENST00000336596 CNOT6Q9ULM6 557 aaKnown RBP7.02□□□□□ -1.29
EPHA3-201ENST00000336596 A0A0G2JPF8 293 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 PRSS51A0A1B0GVH4 220 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 TMEM221A6NGB7 291 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 GABRR3A8MPY1 467 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 HNRNPCL3B7ZW38 293 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 M0R296 226 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 SEC14L5O43304 696 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 C1SP09871 688 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 HNRNPCL4P0DMR1 293 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 RAP2AP10114 183 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 ATF6P18850 670 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 CD70P32970 193 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 DCTP40126 519 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 MERTKQ12866 999 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 FOXC1Q12948 553 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 SLAMF1Q13291 335 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 PDK3Q15120 406 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 KCNJ8Q15842 424 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 ARHGAP11AQ6P4F7 1023 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 TNFAIP8L2Q6P589 184 aaPredicted RBP7.01□□□□□ -1.29
EPHA3-201ENST00000336596 ZNF548Q8NEK5 533 aaPredicted RBP7.01□□□□□ -1.29
EPHA3-201ENST00000336596 SLC2A12Q8TD20 617 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 RCN3Q96D15 328 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 TCEAL4Q96EI5 215 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 ENKD1Q9H0I2 346 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 POLR2J3Q9H1A7 115 aaKnown RBP7.01□□□□□ -1.29
EPHA3-201ENST00000336596 LTB4R2Q9NPC1 389 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 LAMP5Q9UJQ1 280 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 PPM1HQ9ULR3 514 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 PRRC2BQ5JSZ5 2229 aaKnown RBP7.01□□□□□ -1.29
EPHA3-201ENST00000336596 C8orf89P0DMQ9 161 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 CD9P21926 228 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 ECHS1P30084 290 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 GSSP48637 474 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 CDH12P55289 794 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 TBPL1P62380 186 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 SIM1P81133 766 aaPredicted RBP7.01□□□□□ -1.29
EPHA3-201ENST00000336596 PPP2R2BQ00005 443 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 TARDBPQ13148 414 aaKnown RBP eCLIP7.01□□□□□ -1.29
EPHA3-201ENST00000336596 SWI5Q1ZZU3 235 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 RAB6CQ53S08 254 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 PYDC2Q56P42 97 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 ALG10Q5BKT4 473 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 TPRG1LQ5T0D9 272 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 SATL1Q86VE3 508 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 IQCKQ8N0W5 287 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 KCT2Q8NC54 265 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 OR10H4Q8NGA5 316 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 IFI44Q8TCB0 444 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 SORCS1Q8WY21 1168 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 MS4A4EQ96PG1 132 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 TTYH2Q9BSA4 534 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 SLC46A2Q9BY10 475 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 ACTR6Q9GZN1 396 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 RAB6CQ9H0N0 254 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 LINC00597Q9H2U6 94 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 PCDHB14Q9Y5E9 798 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 WIF1Q9Y5W5 379 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 CFAP20Q9Y6A4 193 aaKnown RBP7.01□□□□□ -1.29
EPHA3-201ENST00000336596 CITO14578 2027 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 GOLGA4Q13439 2230 aaKnown RBP7.01□□□□□ -1.29
EPHA3-201ENST00000336596 MYH15Q9Y2K3 1946 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 CCDC182A6NF36 153 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 CENPBD1B2RD01 187 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 FAM189A1O60320 539 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 ITGA5P08648 1049 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 CFL1P23528 166 aaKnown RBP7.01□□□□□ -1.29
EPHA3-201ENST00000336596 MPSTP25325 297 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 FNTBP49356 437 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 ENTPD1P49961 510 aa7.01□□□□□ -1.29
EPHA3-201ENST00000336596 UGT3A2Q3SY77 523 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms