RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 FRG2BQ96QU4 278 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 MCMBPQ9BTE3 642 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 SDR39U1Q9NRG7 319 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-201ENST00000334136 ZSCAN32Q9NX65 697 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 RHCGQ9UBD6 479 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 A0A0G2JN53 185 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 UGT2B17O75795 530 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 PRG2P13727 222 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 ATF4P18848 351 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-201ENST00000334136 GPX3P22352 226 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 NTSP30990 170 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 ARRB2P32121 409 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 IFNGR2P38484 337 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 TUBA1BP68363 451 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 RPP38P78345 283 aaKnown RBP11.24□□□□□ -0.61
HDAC6-201ENST00000334136 SLC36A3Q495N2 470 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 IRAK1BP1Q5VVH5 260 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 TUBA1AQ71U36 451 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 PLXDC1Q8IUK5 500 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 OR8H3Q8N146 312 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 DPH7Q9BTV6 452 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 MED28Q9H204 178 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 MMP27Q9H306 513 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 DSN1Q9H410 356 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 ZFR2Q9UPR6 939 aaKnown RBP11.24□□□□□ -0.61
HDAC6-201ENST00000334136 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 HCN4Q9Y3Q4 1203 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 R4GN57 208 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 ANKRD33BA6NCL7 494 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 ARHGEF33A8MVX0 844 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 PGRMC2O15173 223 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 ALDOCP09972 364 aaKnown RBP11.24□□□□□ -0.61
HDAC6-201ENST00000334136 C7P10643 843 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 RPL3P39023 403 aaKnown RBP11.24□□□□□ -0.61
HDAC6-201ENST00000334136 RORCP51449 518 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 ABHD18Q0P651 414 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 SPCS2Q15005 226 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 CDKN3Q16667 212 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 HACD2Q6Y1H2 254 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 TBC1D15Q8TC07 691 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 TMEM125Q96AQ2 219 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 INSM2Q96T92 566 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-201ENST00000334136 EQTNQ9NQ60 294 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 PLEKHM1Q9Y4G2 1056 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 SERPINB7O75635 380 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 YES1P07947 543 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 CCNYL3P0C7X3 344 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 MEF2AQ02078 507 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-201ENST00000334136 MINDY4Q4G0A6 757 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 CES4AQ5XG92 561 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 RNF111Q6ZNA4 994 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 LARP4Q71RC2 724 aaKnown RBP eCLIP11.24□□□□□ -0.617e-7■■■■■ 35.5
HDAC6-201ENST00000334136 VTCN1Q7Z7D3 282 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 ASCC1Q8N9N2 400 aaKnown RBP11.24□□□□□ -0.61
HDAC6-201ENST00000334136 NAT6Q93015 286 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 CLIP3Q96DZ5 547 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 TEFMQ96QE5 360 aaKnown RBP11.24□□□□□ -0.61
HDAC6-201ENST00000334136 C1QTNF1Q9BXJ1 281 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 ARRDC1-AS1Q9H2J1 176 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 ANKRA2Q9H9E1 313 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 LRIT1Q9P2V4 623 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 SERTAD3Q9UJW9 196 aa11.24□□□□□ -0.61
HDAC6-201ENST00000334136 PRAMEF33A0A0G2JMD5 474 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 OR10H2O60403 315 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 PRAMEF10O60809 474 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 APOL3O95236 402 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 STATHP02808 62 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 FUCA1P04066 466 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 STSP08842 583 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 ANXA8P13928 327 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 SDC2P34741 201 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 PPP5CP53041 499 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 MAPK12P53778 367 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 SRSF11Q05519 484 aaKnown RBP11.23□□□□□ -0.61
HDAC6-201ENST00000334136 LGALS3BPQ08380 585 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 TARDBPQ13148 414 aaKnown RBP eCLIP11.23□□□□□ -0.615e-7■■■■■ 32
HDAC6-201ENST00000334136 SRSF5Q13243 272 aaKnown RBP11.23□□□□□ -0.61
HDAC6-201ENST00000334136 ABRAXAS2Q15018 415 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 RPE65Q16518 533 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 C18orf21Q32NC0 220 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-201ENST00000334136 LILRA3Q8N6C8 439 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-201ENST00000334136 ZFP3Q96NJ6 502 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 C19orf43Q9BQ61 176 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 DPH2Q9BQC3 489 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-201ENST00000334136 SLC22A4Q9H015 551 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 POLR2J3Q9H1A7 115 aaKnown RBP11.23□□□□□ -0.61
HDAC6-201ENST00000334136 TPT1P8Q9HAU6 139 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 STOX2Q9P2F5 926 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-201ENST00000334136 FTSJ1Q9UET6 329 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 FAM221BA6H8Z2 402 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 CDRT1O95170 752 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 EBLN1P0CF75 366 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 CKMT1AP12532 417 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 AVPR2P30518 371 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 BCL7AQ4VC05 210 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 RFTN2Q52LD8 501 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-201ENST00000334136 PYCR3Q53H96 274 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 LRRC20Q8TCA0 184 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 ASB12Q8WXK4 309 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 SLC38A4Q969I6 547 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms