RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 STOMP27105 288 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 GPC1P35052 558 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 TPMTP51580 245 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 RRAS2P62070 204 aaPredicted RBP10.4□□□□□ -0.75
LSM3-201ENST00000306024 DEFA5Q01523 94 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 TFF2Q03403 129 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 MESP2Q0VG99 397 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 NFATC2Q13469 925 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 ZBTB37Q5TC79 503 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 ALG1LQ6GMV1 187 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 NLRP8Q86W28 1048 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 SFTPA1Q8IWL2 248 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 TCTE3Q8IZS6 198 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 ZNF548Q8NEK5 533 aaPredicted RBP10.4□□□□□ -0.75
LSM3-201ENST00000306024 TSTD1Q8NFU3 115 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 CEP76Q8TAP6 659 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 TFB2MQ9H5Q4 396 aaKnown RBP10.4□□□□□ -0.75
LSM3-201ENST00000306024 MAGIXQ9H6Y5 334 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 RANBP3Q9H6Z4 567 aaPredicted RBP10.4□□□□□ -0.75
LSM3-201ENST00000306024 C3orf14Q9HBI5 128 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 IFT46Q9NQC8 304 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 PRSS16Q9NQE7 514 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 NKIRAS2Q9NYR9 191 aa10.4□□□□□ -0.75
LSM3-201ENST00000306024 TMEFF2Q9UIK5 374 aaPredicted RBP10.4□□□□□ -0.75
LSM3-201ENST00000306024 GRXCR2A6NFK2 248 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 IQCF5A8MTL0 148 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 M0R082 166 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 M0R233 179 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 SUV39H1O43463 412 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 ULK1O75385 1050 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 ADH1BP00325 375 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 NAGAP17050 411 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 EFNA1P20827 205 aaPredicted RBP10.39□□□□□ -0.75
LSM3-201ENST00000306024 NSG1P42857 185 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 SPINT3P49223 89 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 ZNF140P52738 457 aaPredicted RBP10.39□□□□□ -0.75
LSM3-201ENST00000306024 LAIR2Q6ISS4 152 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 CAPN13Q6MZZ7 669 aaPredicted RBP10.39□□□□□ -0.75
LSM3-201ENST00000306024 PHYKPLQ8IUZ5 450 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 OR8K3Q8NH51 312 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 FBXW5Q969U6 566 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 PANX1Q96RD7 426 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 TRIB3Q96RU7 358 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 SMAD5Q99717 465 aaKnown RBP10.39□□□□□ -0.75
LSM3-201ENST00000306024 LIN7BQ9HAP6 207 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 IL26Q9NPH9 171 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 WASH6PQ9NQA3 447 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 HCN3Q9P1Z3 774 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 TOR1AO14656 332 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 NPC1O15118 1278 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 LYRM1O43325 122 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 S1PR4O95977 384 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 PAK4O96013 591 aaPredicted RBP10.39□□□□□ -0.75
LSM3-201ENST00000306024 EGFP01133 1207 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 S100A9P06702 114 aaKnown RBP10.39□□□□□ -0.75
LSM3-201ENST00000306024 ANXA3P12429 323 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 DGKAP23743 735 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 ATP6V1E1P36543 226 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 RFX2P48378 723 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 CDH12P55289 794 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 IQCCQ4KMZ1 466 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.39□□□□□ -0.75
LSM3-201ENST00000306024 CASP12Q6UXS9 341 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 PRSS42Q7Z5A4 293 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 PIANPQ8IYJ0 282 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 OR10G2Q8NGC3 310 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 TMEM80Q96HE8 168 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 HSH2DQ96JZ2 352 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 SERHL2Q9H4I8 314 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 SERHLQ9NQF3 203 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 TCRBV21S2A2A0A5A6 115 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 ASPDHA6ND91 283 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 MROH6A6NGR9 719 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 KERAO60938 352 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 CCNB2O95067 398 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 CCNDBP1O95273 360 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 APOC3P02656 99 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 RETP07949 1114 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 FCARP24071 287 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 ITGB7P26010 798 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 SOX3P41225 446 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 PTPN5P54829 565 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 MAZP56270 477 aaKnown RBP10.39□□□□□ -0.75
LSM3-201ENST00000306024 RPS7P62081 194 aaKnown RBP10.39□□□□□ -0.75
LSM3-201ENST00000306024 LGALS3BPQ08380 585 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 KCNC3Q14003 757 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 RNASE12Q5GAN4 147 aaKnown RBP10.39□□□□□ -0.75
LSM3-201ENST00000306024 GPRC6AQ5T6X5 926 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 GLCCI1Q86VQ1 547 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 ENTHD1Q8IYW4 607 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 NXPE1Q8N323 547 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 SIDT2Q8NBJ9 832 aaKnown RBP10.39□□□□□ -0.75
LSM3-201ENST00000306024 OR5M11Q96RB7 305 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 ZDHHC3Q9NYG2 299 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 SEC14L4Q9UDX3 406 aa10.39□□□□□ -0.75
LSM3-201ENST00000306024 A0A1B0GW55 424 aa10.38□□□□□ -0.75
LSM3-201ENST00000306024 LRRC72A6NJI9 287 aa10.38□□□□□ -0.75
LSM3-201ENST00000306024 SOX1O00570 391 aaPredicted RBP10.38□□□□□ -0.75
LSM3-201ENST00000306024 TRIM3O75382 744 aaPredicted RBP10.38□□□□□ -0.75
LSM3-201ENST00000306024 DUX4L2P0CJ85 424 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms