RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SPACA7Q96KW9 195 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 NRTNQ99748 197 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 NEURL2Q9BR09 285 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 CUEDC1Q9NWM3 386 aaPredicted RBP12.68□□□□□ -0.38
CASC4-201ENST00000299957 EXTL2Q9UBQ6 330 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 A0A1B0GVT2 93 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 A0A1W2PRG6 482 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 SMLR1H3BR10 107 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 IDSP22304 550 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 ALAS2P22557 587 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 PPM1AP35813 382 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 ACTR1BP42025 376 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 ACTR1AP61163 376 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 RACK1P63244 317 aaKnown RBP12.67□□□□□ -0.38
CASC4-201ENST00000299957 SLC35A2P78381 396 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 ZNF750Q32MQ0 723 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 DEFB134Q4QY38 66 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 GAREM2Q75VX8 874 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 RGMAQ96B86 450 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 NELL2Q99435 816 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 SPHK2Q9NRA0 654 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 ERVW-1Q9UQF0 538 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 UBR3Q6ZT12 1888 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 FAM86C2PA6NEL3 165 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 FAM155AB1AL88 458 aaPredicted RBP12.67□□□□□ -0.38
CASC4-201ENST00000299957 CDK1P06493 297 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 NAA10P41227 235 aaPredicted RBP12.67□□□□□ -0.38
CASC4-201ENST00000299957 SUOXP51687 545 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 SMSP52788 366 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 COMMD2Q86X83 199 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 GALNT13Q8IUC8 556 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 RIMKLAQ8IXN7 391 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 GATSQ8NAP1 163 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 MCHR1Q99705 422 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 I3L521 148 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 EEF1E1O43324 174 aaKnown RBP12.67□□□□□ -0.38
CASC4-201ENST00000299957 ORC5O43913 435 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 CYP17A1P05093 508 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 CSN2P05814 226 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 GYPBP06028 91 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 RHOP08100 348 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 SIM1P81133 766 aaPredicted RBP12.67□□□□□ -0.38
CASC4-201ENST00000299957 TUBA3EQ6PEY2 450 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 ZNF613Q6PF04 617 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 LINGO2Q7L985 606 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 DNAJC22Q8N4W6 341 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 COX18Q8N8Q8 333 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 BEST4Q8NFU0 473 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 NEDD4LQ96PU5 975 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 ABCG4Q9H172 646 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 PDFQ9HBH1 243 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 BRD7Q9NPI1 651 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 NDUFAF4Q9P032 175 aa12.67□□□□□ -0.38
CASC4-201ENST00000299957 IGLON5A6NGN9 336 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 TRIM64CA6NLI5 447 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 ANKRD28O15084 1053 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 C1SP09871 688 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 CSNK2A2P19784 350 aaPredicted RBP12.66□□□□□ -0.38
CASC4-201ENST00000299957 BIKQ13323 160 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 LARS2Q15031 903 aaKnown RBP12.66□□□□□ -0.38
CASC4-201ENST00000299957 ZNF542PQ5EBM4 170 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 SERPINA11Q86U17 422 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 SYT14Q8NB59 555 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 SUN5Q8TC36 379 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 ZNF486Q96H40 463 aaPredicted RBP12.66□□□□□ -0.38
CASC4-201ENST00000299957 LMAN2LQ9H0V9 348 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 RANGRFQ9HD47 186 aaPredicted RBP12.66□□□□□ -0.38
CASC4-201ENST00000299957 PHPT1Q9NRX4 125 aaPredicted RBP12.66□□□□□ -0.38
CASC4-201ENST00000299957 LOC102723532A0A0G2JNH3 316 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 FAM25EA8MYX2 175 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 GABARAPO95166 117 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 HOXD8P13378 290 aaPredicted RBP12.66□□□□□ -0.38
CASC4-201ENST00000299957 CR2P20023 1033 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 PYCR1P32322 319 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 SOX2P48431 317 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 SLAMF1Q13291 335 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 KLHL22Q53GT1 634 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 AFMIDQ63HM1 303 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 FIGNL1Q6PIW4 674 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 CD300LGQ6UXG3 332 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 ZNF761Q86XN6 746 aaPredicted RBP12.66□□□□□ -0.38
CASC4-201ENST00000299957 MEIOBQ8N635 442 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 OR4F15Q8NGB8 312 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 OR52N2Q8NGI0 321 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 PXYLP1Q8TE99 480 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 SMPDL3AQ92484 453 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 NKD1Q969G9 470 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 P2RY12Q9H244 342 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 EGLN3Q9H6Z9 239 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 NLGN3Q9NZ94 848 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 SEC14L4Q9UDX3 406 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 COL24A1Q17RW2 1714 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 FOCADQ5VW36 1801 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 FAM171A2A8MVW0 826 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 JRKO75564 520 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 YES1P07947 543 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 ACVR1Q04771 509 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 ZNF155Q12901 538 aaPredicted RBP12.66□□□□□ -0.38
CASC4-201ENST00000299957 ZNF805Q5CZA5 627 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 PRPF38BQ5VTL8 546 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms