RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 TCP10LQ8TDR4 215 aa11.31□□□□□ -0.6
HMGB2-201ENST00000296503 HBEGFQ99075 208 aa11.31□□□□□ -0.6
HMGB2-201ENST00000296503 MRPL1Q9BYD6 325 aaKnown RBP11.31□□□□□ -0.6
HMGB2-201ENST00000296503 SLC29A3Q9BZD2 475 aa11.31□□□□□ -0.6
HMGB2-201ENST00000296503 RPF2Q9H7B2 306 aaKnown RBP11.31□□□□□ -0.6
HMGB2-201ENST00000296503 DDX31Q9H8H2 851 aaKnown RBP11.31□□□□□ -0.6
HMGB2-201ENST00000296503 BRF2Q9HAW0 419 aa11.31□□□□□ -0.6
HMGB2-201ENST00000296503 LYARQ9NX58 379 aaKnown RBP11.31□□□□□ -0.6
HMGB2-201ENST00000296503 MKS1Q9NXB0 559 aa11.31□□□□□ -0.6
HMGB2-201ENST00000296503 PTTG2Q9NZH5 202 aa11.31□□□□□ -0.6
HMGB2-201ENST00000296503 LUZP4Q9P127 313 aa11.31□□□□□ -0.6
HMGB2-201ENST00000296503 SLC17A7Q9P2U7 560 aa11.31□□□□□ -0.6
HMGB2-201ENST00000296503 ATG4BQ9Y4P1 393 aa11.31□□□□□ -0.6
HMGB2-201ENST00000296503 ZNF462Q96JM2 2506 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 BLACEA4D250 179 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 CAPN14A8MX76 684 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 PEX1O43933 1283 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 TRIM13O60858 407 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 MYO1DO94832 1006 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 SEMA3DO95025 777 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 KLK1P06870 262 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 FAM58BPP0C7Q3 252 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 PGM1P36871 562 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 RANBP1P43487 201 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 CD97P48960 835 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 MLLT10P55197 1068 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 ID2Q02363 134 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 TLE1Q04724 770 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 ASPHQ12797 758 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 PLEKHN1Q494U1 663 aaPredicted RBP11.3□□□□□ -0.6
HMGB2-201ENST00000296503 CCNYL2Q5T2Q4 361 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 C18orf63Q68DL7 685 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 SLC6A19Q695T7 634 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 OR4N5Q8IXE1 308 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 CNDP1Q96KN2 507 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 ZNF354BQ96LW1 612 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 BTBD9Q96Q07 612 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 KCNA7Q96RP8 456 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 ZNF717Q9BY31 904 aaPredicted RBP11.3□□□□□ -0.6
HMGB2-201ENST00000296503 SHCBP1LQ9BZQ2 653 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 ILKAPQ9H0C8 392 aaPredicted RBP11.3□□□□□ -0.6
HMGB2-201ENST00000296503 WDR41Q9HAD4 459 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 NPHS2Q9NP85 383 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 MMP25Q9NPA2 562 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 PLA2G3Q9NZ20 509 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 VPS29Q9UBQ0 182 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 B3GNT3Q9Y2A9 372 aa11.3□□□□□ -0.6
HMGB2-201ENST00000296503 A0A0A6YYD5 115 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 DYTNA2CJ06 578 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 SAGE2PA6NJ88 616 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 TGFBR3LH3BV60 316 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 UBFD1O14562 309 aaKnown RBP11.29□□□□□ -0.6
HMGB2-201ENST00000296503 PROM1O43490 865 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 TMPRSS11DO60235 418 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 CIB2O75838 187 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 ENO1P06733 434 aaKnown RBP11.29□□□□□ -0.6
HMGB2-201ENST00000296503 PLA2G2AP14555 144 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 PPP2R1BP30154 601 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 TAS2R50P59544 299 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 ARG2P78540 354 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 ZNF33BQ06732 778 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 SERTAD2Q14140 314 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 PCLAFQ15004 111 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 FCRLBQ6BAA4 426 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 MRM1Q6IN84 353 aaKnown RBP11.29□□□□□ -0.6
HMGB2-201ENST00000296503 SCIMPQ6UWF3 145 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 IGFL2Q6UWQ7 119 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 FRMD7Q6ZUT3 714 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 METTL4Q8N3J2 472 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 TMEM132CQ8N3T6 1108 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 RAB3IL1Q8TBN0 382 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 WDR60Q8WVS4 1066 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 SREK1Q8WXA9 508 aaKnown RBP11.29□□□□□ -0.6
HMGB2-201ENST00000296503 TANKQ92844 425 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 PNPLA2Q96AD5 504 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 DGCR14Q96DF8 476 aaKnown RBP11.29□□□□□ -0.6
HMGB2-201ENST00000296503 SIKE1Q9BRV8 207 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 NDE1Q9NXR1 346 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 ASB4Q9Y574 426 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 CLCA3PQ9Y6N3 262 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 SYNDIG1LA6NDD5 238 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 J3QKU1 62 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 F10P00742 488 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 HSD3B1P14060 373 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 HSD3B2P26439 372 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 SERPINB3P29508 390 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 SOX11P35716 441 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 TNFRSF17Q02223 184 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 BTKQ06187 659 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 RINLQ6ZS11 566 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 CATSPER1Q8NEC5 780 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 C7orf57Q8NEG2 295 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 B3GNT7Q8NFL0 401 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 ELP5Q8TE02 316 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 ANKRD9Q96BM1 317 aaPredicted RBP11.29□□□□□ -0.6
HMGB2-201ENST00000296503 RBM18Q96H35 190 aaKnown RBP11.29□□□□□ -0.6
HMGB2-201ENST00000296503 GATA5Q9BWX5 397 aaPredicted RBP11.29□□□□□ -0.6
HMGB2-201ENST00000296503 DEFB126Q9BYW3 111 aa11.29□□□□□ -0.6
HMGB2-201ENST00000296503 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.29□□□□□ -0.64e-15■□□□□ 10.1
HMGB2-201ENST00000296503 CDCP1Q9H5V8 836 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms