RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 PUM1Q14671 1186 aaKnown RBP eCLIP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 ARHGAP19Q14CB8 494 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 SPCS2Q15005 226 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 MAD2L1BPQ15013 274 aaPredicted RBP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 RAB30Q15771 203 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 SOWAHCQ53LP3 525 aaPredicted RBP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 CLEC12AQ5QGZ9 265 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 RBM48Q5RL73 367 aaKnown RBP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 C6orf132Q5T0Z8 1188 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 PRSS41Q7RTY9 318 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 ZNF605Q86T29 641 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 ENTHD1Q8IYW4 607 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 METTL27Q8N6F8 245 aaPredicted RBP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 FAM46DQ8NEK8 389 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 OR13H1Q8NG92 308 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 MS4A6EQ96DS6 147 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 WDR34Q96EX3 536 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 CNRIP1Q96F85 164 aaPredicted RBP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 BMFQ96LC9 184 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 WDR92Q96MX6 357 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 CHST8Q9H2A9 424 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 NMNAT1Q9HAN9 279 aaPredicted RBP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 PELI2Q9HAT8 420 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 TUBA8Q9NY65 449 aaPredicted RBP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 DNAJC27Q9NZQ0 273 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 APOBEC3BQ9UH17 382 aaKnown RBP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 MAPRE3Q9UPY8 281 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 CACNA1CQ13936 2221 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 UNC13CQ8NB66 2214 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 MDC1Q14676 2089 aaKnown RBP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 LOC105369274A0A096LPK9 316 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 LOC102723532A0A0G2JNH3 316 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 C2CD4DB7Z1M9 353 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 CCNB2O95067 398 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 CTSEP14091 401 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 ATP5A1P25705 553 aaKnown RBP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 PKLRP30613 574 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 NUP107P57740 925 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 ILF3Q12906 894 aaKnown RBP eCLIP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 ADAM15Q13444 863 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 GPR18Q14330 331 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 MED22Q15528 200 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 CCNJQ5T5M9 372 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 KIAA1161Q6NSJ0 714 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 ZC3H14Q6PJT7 736 aaKnown RBP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 PTCHD4Q6ZW05 846 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 C16orf62Q7Z3J2 963 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 CAMKMTQ7Z624 323 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 PARGQ86W56 976 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 CCDC103Q8IW40 242 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 HOMEZQ8IX15 550 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 OR4N4Q8N0Y3 316 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 TBC1D19Q8N5T2 526 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 OR5T3Q8NGG3 340 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 RDH12Q96NR8 316 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 AMDHD1Q96NU7 426 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 CSF3RQ99062 836 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 CDCA3Q99618 268 aaPredicted RBP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 PIP5K1AQ99755 562 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 SERHL2Q9H4I8 314 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 ZNF576Q9H609 170 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 NEUROD4Q9HD90 331 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 EXOSC4Q9NPD3 245 aaKnown RBP5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 RNF6Q9Y252 685 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 SLC17A4Q9Y2C5 497 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 NTNG1Q9Y2I2 539 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 PCDHGA6Q9Y5G7 932 aa5.72□□□□□ -1.49
TNFSF4-201ENST00000281834 NPIPA5A0A0B4J1W7 369 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 SERTM1A2A2V5 107 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 ZNF99A8MXY4 864 aaPredicted RBP5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 NPIPA7E9PJI5 369 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 JRKO75564 520 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 CH25HO95992 272 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 NPIPA8P0DM63 369 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 ITGA2P17301 1181 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 CPN2P22792 545 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 LTBRP36941 435 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 HSD17B2P37059 387 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 EIF2DP41214 584 aaKnown RBP5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 PSMD7P51665 324 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 GP2P55259 537 aaKnown RBP5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 RPS3AP61247 264 aaKnown RBP5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 AQP6Q13520 282 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 MAPK11Q15759 364 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 NNATQ16517 81 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 FRMPD2BQ6IN97 320 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 ABHD17CQ6PCB6 329 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 BORAQ6PGQ7 559 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 GPR32P1Q8NGA4 272 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 OR52E4Q8NGH9 312 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 OR4D11Q8NGI4 311 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 OR13F1Q8NGS4 319 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 OR2L8Q8NGY9 312 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 NDNFQ8TB73 568 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 CREB3L4Q8TEY5 395 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 GAB3Q8WWW8 586 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 METTL2AQ96IZ6 378 aaKnown RBP5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 CCDC3Q9BQI4 270 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 TIMM29Q9BSF4 260 aa5.71□□□□□ -1.49
TNFSF4-201ENST00000281834 IL21RQ9HBE5 538 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms