RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 GMPPBQ9Y5P6 360 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 LOC105369274A0A096LPK9 316 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 LOC102723532A0A0G2JNH3 316 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 FAM221BA6H8Z2 402 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 OR5K4A6NMS3 321 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 C2orf74A8MZ97 194 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 SLC1A7O00341 560 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 SLC5A2P31639 672 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 HMGA2P52926 109 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 IL5RAQ01344 420 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 KCNC4Q03721 635 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 FZD5Q13467 585 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 TOP3AQ13472 1001 aaPredicted RBP17.44■□□□□ 0.38
HOXC11-201ENST00000243082 C1orf61Q13536 156 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 MICAQ29983 383 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 BROXQ5VW32 411 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 FRMPD2BQ6IN97 320 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 OR4N4Q8N0Y3 316 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 SLC5A8Q8N695 610 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 SETD9Q8NE22 299 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 OR10G2Q8NGC3 310 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 KLHL6Q8WZ60 621 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 C10orf90Q96M02 699 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 GAS2L1Q99501 681 aaPredicted RBP17.44■□□□□ 0.38
HOXC11-201ENST00000243082 RLIMQ9NVW2 624 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 KCMF1Q9P0J7 381 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 P2RX2Q9UBL9 471 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 HSPE1-MOB4S4R3N1 261 aa17.44■□□□□ 0.38
HOXC11-201ENST00000243082 IGHV1OR15-9A0A0B4J2B8 117 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 SLC28A2O43868 658 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 ABCB7O75027 752 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 PDE9AO76083 593 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 CPNE6O95741 557 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 HTR1AP08908 422 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 PVRP15151 417 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 RHCEP18577 417 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 NUDT1P36639 197 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 PRKAG1P54619 331 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 GABARAPL2P60520 117 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 RAB39AQ14964 217 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 ZNF566Q969W8 418 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 THAP11Q96EK4 314 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 KLHDC7BQ96G42 594 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 SLC6A18Q96N87 628 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 PITX2Q99697 317 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 TREX2Q9BQ50 279 aaPredicted RBP17.43■□□□□ 0.38
HOXC11-201ENST00000243082 GABARAPL3Q9BY60 117 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 HRASLS2Q9NWW9 162 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 TRPC4Q9UBN4 977 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 SCN3AQ9NY46 2000 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 IFNW1P05000 195 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 NR2F6P10588 404 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 CTSEP14091 401 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 MPIP34949 423 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 KCNJ5P48544 419 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 RPP38P78345 283 aaKnown RBP17.43■□□□□ 0.38
HOXC11-201ENST00000243082 RELAQ04206 551 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 SUZ12Q15022 739 aaKnown RBP17.43■□□□□ 0.38
HOXC11-201ENST00000243082 NEDD8Q15843 81 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 TMEM107Q6UX40 140 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 CCDC71Q8IV32 467 aaPredicted RBP17.43■□□□□ 0.38
HOXC11-201ENST00000243082 ALDH16A1Q8IZ83 802 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 BAHD1Q8TBE0 780 aaPredicted RBP17.43■□□□□ 0.38
HOXC11-201ENST00000243082 ZCCHC10Q8TBK6 192 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 ZFYVE21Q9BQ24 234 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 BLOC1S6Q9UL45 172 aa17.43■□□□□ 0.38
HOXC11-201ENST00000243082 FAM32AQ9Y421 112 aaKnown RBP17.43■□□□□ 0.38
HOXC11-201ENST00000243082 FFAR1O14842 300 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 PCDH17O14917 1159 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 DNAJB6O75190 326 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 NDUFS2O75306 463 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 ZNF217O75362 1048 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 HMGN2P05204 90 aaKnown RBP17.42■□□□□ 0.38
HOXC11-201ENST00000243082 FHP07954 510 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 CCDC159P0C7I6 412 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 JUNBP17275 347 aaPredicted RBP17.42■□□□□ 0.38
HOXC11-201ENST00000243082 PCSK6P29122 969 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 MAGEA8P43361 318 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 KHKP50053 298 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 LIM2P55344 173 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 RUNX2Q13950 521 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 GANABQ14697 944 aaKnown RBP17.42■□□□□ 0.38
HOXC11-201ENST00000243082 LASP1Q14847 261 aaKnown RBP17.42■□□□□ 0.38
HOXC11-201ENST00000243082 DEFB134Q4QY38 66 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 XAF1Q6GPH4 301 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 LAIR1Q6GTX8 287 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 BHLHB9Q6PI77 547 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 TSPYL5Q86VY4 417 aaPredicted RBP17.42■□□□□ 0.38
HOXC11-201ENST00000243082 SPARTQ8N0X7 666 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 LGI4Q8N135 537 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 OTUB1Q96FW1 271 aaPredicted RBP17.42■□□□□ 0.38
HOXC11-201ENST00000243082 SERINC2Q96SA4 455 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 ZNF607Q96SK3 696 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 YIPF4Q9BSR8 244 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 ROGDIQ9GZN7 287 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 CXorf21Q9HAI6 301 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 GIMAP4Q9NUV9 329 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 PAK1IP1Q9NWT1 392 aaPredicted RBP17.42■□□□□ 0.38
HOXC11-201ENST00000243082 AASSQ9UDR5 926 aa17.42■□□□□ 0.38
HOXC11-201ENST00000243082 KCND3Q9UK17 655 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 545.3 ms