RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 TRIM43Q96BQ3 446 aaPredicted RBP14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 MRGPRX3Q96LB0 322 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 MND1Q9BWT6 205 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 TMEM38AQ9H6F2 299 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 ERVK13-1Q9NX77 482 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 TEX10Q9NXF1 929 aaPredicted RBP14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 ACSL5Q9ULC5 683 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 NEUROG3Q9Y4Z2 214 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 C17orf113A0A1B0GUU1 675 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 FAM170BA6NMN3 283 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 CDRT1O95170 752 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 KAT7O95251 611 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 SOX3P41225 446 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 SLC19A1P41440 591 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 RORCP51449 518 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 BTN3A2P78410 334 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 GBX1Q14549 363 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 BCL7AQ4VC05 210 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 KLHL12Q53G59 568 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 OR4C11Q6IEV9 310 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 CDK20Q8IZL9 346 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 TMIEQ8NEW7 156 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 PIK3R3Q92569 461 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 RAB7BQ96AH8 199 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 OR5M11Q96RB7 305 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 CCDC3Q9BQI4 270 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 CENPOQ9BU64 300 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 EPHX3Q9H6B9 360 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 SLC35C2Q9NQQ7 365 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 RWDD3Q9Y3V2 267 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 SLC30A4O14863 429 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 TNFRSF21O75509 655 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 ZNF45Q02386 682 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 RPA4Q13156 261 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 KIAA1161Q6NSJ0 714 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 TMEM107Q6UX40 140 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 PIGXQ8TBF5 258 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 SPPL3Q8TCT6 385 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 FKBP10Q96AY3 582 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 LRR1Q96L50 414 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 SLC30A2Q9BRI3 323 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 SGPP1Q9BX95 441 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 FZD3Q9NPG1 666 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 ACER3Q9NUN7 267 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 TEKT2Q9UIF3 430 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 ATG2BQ96BY7 2078 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 GDI1P31150 447 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 P2RY2P41231 377 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 STXBP1P61764 594 aaKnown RBP14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 PLAG1Q6DJT9 500 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 PNCKQ6P2M8 343 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 DYNC2LI1Q8TCX1 351 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 YIPF6Q96EC8 236 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 MARCH7Q9H992 704 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 TBC1D17Q9HA65 648 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 C1orf226A1L170 272 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 SH3D21A4FU49 640 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 FRS3O43559 492 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 IMPDH2P12268 514 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 IL12RB1P42701 662 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 SMSP52788 366 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 LAS2Q8IYD9 372 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 KAT2AQ92830 837 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 COQ10AQ96MF6 247 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 TREX2Q9BQ50 279 aaPredicted RBP14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 ADAP2Q9NPF8 381 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 PTGFRNQ9P2B2 879 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 GPC6Q9Y625 555 aaPredicted RBP14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 AGAP5A6NIR3 686 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 BMP7P18075 431 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 SLC46A3Q7Z3Q1 461 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 OOSP2Q86WS3 158 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 RBM45Q8IUH3 476 aaKnown RBP14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 VMP1Q96GC9 406 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 RAB11FIP5Q9BXF6 653 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 GABARAPL3Q9BY60 117 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 MROQ9BYG7 248 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 PELI2Q9HAT8 420 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 RC3H2Q9HBD1 1191 aaKnown RBP14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 SAGE1Q9NXZ1 904 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 MALT1Q9UDY8 824 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 FBXO10Q9UK96 956 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 MKLN1Q9UL63 735 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 COLEC10Q9Y6Z7 277 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 PLXNA3P51805 1871 aa14.19□□□□□ -0.14
UBE2D4-201ENST00000222402 SEMA3DO95025 777 aa14.18□□□□□ -0.14
UBE2D4-201ENST00000222402 CD72P21854 359 aa14.18□□□□□ -0.14
UBE2D4-201ENST00000222402 CPN2P22792 545 aa14.18□□□□□ -0.14
UBE2D4-201ENST00000222402 RAB28P51157 221 aa14.18□□□□□ -0.14
UBE2D4-201ENST00000222402 SMARCD3Q6STE5 483 aa14.18□□□□□ -0.14
UBE2D4-201ENST00000222402 KLHL17Q6TDP4 642 aa14.18□□□□□ -0.14
UBE2D4-201ENST00000222402 KLHDC8AQ8IYD2 350 aa14.18□□□□□ -0.14
UBE2D4-201ENST00000222402 C7orf61Q8IZ16 206 aa14.18□□□□□ -0.14
UBE2D4-201ENST00000222402 DOK4Q8TEW6 326 aa14.18□□□□□ -0.14
UBE2D4-201ENST00000222402 PITX2Q99697 317 aa14.18□□□□□ -0.14
UBE2D4-201ENST00000222402 TMEM184CQ9NVA4 438 aa14.18□□□□□ -0.14
UBE2D4-201ENST00000222402 NCKAP1Q9Y2A7 1128 aa14.18□□□□□ -0.14
UBE2D4-201ENST00000222402 PCDHGB1Q9Y5G3 927 aa14.18□□□□□ -0.14
UBE2D4-201ENST00000222402 CCDC88CQ9P219 2028 aa14.18□□□□□ -0.14
UBE2D4-201ENST00000222402 PRKRAO75569 313 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms