RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 FAM180BQ6P0A1 224 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 SLC39A5Q6ZMH5 540 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 PDZD3Q86UT5 571 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 C17orf64Q86WR6 236 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 DCUN1D3Q8IWE4 304 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 PHC2Q8IXK0 858 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 TCEANCQ8N8B7 351 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 VANGL1Q8TAA9 524 aaPredicted RBP12.62□□□□□ -0.39
SRP54-201ENST00000216774 SLC7A13Q8TCU3 470 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 CAPSLQ8WWF8 208 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 RAB8BQ92930 207 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 AIF1LQ9BQI0 150 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 SNTG1Q9NSN8 517 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 ACSS1Q9NUB1 689 aaPredicted RBP12.62□□□□□ -0.39
SRP54-201ENST00000216774 HCN2Q9UL51 889 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 WNT6Q9Y6F9 365 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 HEPACAM2A8MVW5 462 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 FAM47E-STBD1D6RA91 191 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 ANHXE9PGG2 379 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 IL1AP01583 271 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 ERGP11308 486 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 OPRD1P41143 372 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 PRMT2P55345 433 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 ST8SIA6P61647 398 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 HSPB3Q12988 150 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 RPA4Q13156 261 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 ARHGAP19Q14CB8 494 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 LARS2Q15031 903 aaKnown RBP12.61□□□□□ -0.39
SRP54-201ENST00000216774 MLC1Q15049 377 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 ZNF517Q6ZMY9 492 aaPredicted RBP12.61□□□□□ -0.39
SRP54-201ENST00000216774 MMAAQ8IVH4 418 aaKnown RBP12.61□□□□□ -0.39
SRP54-201ENST00000216774 LAX1Q8IWV1 398 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 SLC7A5P1Q8MH63 180 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 CLDN22Q8N7P3 220 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 FAM181AQ8N9Y4 354 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 SLC25A46Q96AG3 418 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 IL17FQ96PD4 163 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 TREX2Q9BQ50 279 aaPredicted RBP12.61□□□□□ -0.39
SRP54-201ENST00000216774 SRRQ9GZT4 340 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 WASH6PQ9NQA3 447 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 P2RX2Q9UBL9 471 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 TBX21Q9UL17 535 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 CMAHPQ9Y471 501 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 KIAA1549LQ6ZVL6 1849 aa12.61□□□□□ -0.39
SRP54-201ENST00000216774 B4GALT2O60909 372 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 NME6O75414 186 aaPredicted RBP12.6□□□□□ -0.39
SRP54-201ENST00000216774 RAB36O95755 333 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 TP53P04637 393 aaPredicted RBP12.6□□□□□ -0.39
SRP54-201ENST00000216774 CYP17A1P05093 508 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 WEE1P30291 646 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 ZNF79Q15937 498 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 TRIM60Q495X7 471 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 WDR53Q7Z5U6 358 aaPredicted RBP12.6□□□□□ -0.39
SRP54-201ENST00000216774 RAB43Q86YS6 212 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 RBM45Q8IUH3 476 aaKnown RBP12.6□□□□□ -0.39
SRP54-201ENST00000216774 TBC1D19Q8N5T2 526 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 ZNF366Q8N895 744 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 ANKRD53Q8N9V6 530 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 OR4D11Q8NGI4 311 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 WFIKKN2Q8TEU8 576 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 TRMT61AQ96FX7 289 aaKnown RBP12.6□□□□□ -0.39
SRP54-201ENST00000216774 SNX18Q96RF0 628 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 F2RL3Q96RI0 385 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 PITHD1Q9GZP4 211 aaPredicted RBP12.6□□□□□ -0.39
SRP54-201ENST00000216774 ABCG4Q9H172 646 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 TP63Q9H3D4 680 aaPredicted RBP12.6□□□□□ -0.39
SRP54-201ENST00000216774 MUTYHQ9UIF7 546 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 A4GNTQ9UNA3 340 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 RTCAO00442 366 aaKnown RBP12.6□□□□□ -0.39
SRP54-201ENST00000216774 SLC28A2O43868 658 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 IL7P13232 177 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 C6P13671 934 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 CPEP16870 476 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 HSD17B2P37059 387 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 RFX2P48378 723 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 CCT3P49368 545 aaKnown RBP12.6□□□□□ -0.39
SRP54-201ENST00000216774 BNC1Q01954 994 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 ARHGEF6Q15052 776 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 SYT14P1Q58G82 188 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 ATAD3CQ5T2N8 411 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 LIPKQ5VXJ0 399 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 FAM83HQ6ZRV2 1179 aaPredicted RBP12.6□□□□□ -0.39
SRP54-201ENST00000216774 C11orf96Q7Z7L8 435 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 NUDT13Q86X67 352 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 OR5AR1Q8NGP9 310 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 DEFB118Q96PH6 123 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 PCBD2Q9H0N5 130 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 PAK6Q9NQU5 681 aaPredicted RBP12.6□□□□□ -0.39
SRP54-201ENST00000216774 ZSCAN32Q9NX65 697 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 TAS2R7Q9NYW3 318 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 TVP23BQ9NYZ1 205 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 TESQ9UGI8 421 aaKnown RBP12.6□□□□□ -0.39
SRP54-201ENST00000216774 ADAM29Q9UKF5 820 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 KLHL20Q9Y2M5 609 aa12.6□□□□□ -0.39
SRP54-201ENST00000216774 FAM172BPA6NC97 362 aa12.59□□□□□ -0.39
SRP54-201ENST00000216774 SLC9A3R1O14745 358 aaPredicted RBP12.59□□□□□ -0.39
SRP54-201ENST00000216774 KIAA0355O15063 1070 aa12.59□□□□□ -0.39
SRP54-201ENST00000216774 PRKYO43930 277 aa12.59□□□□□ -0.39
SRP54-201ENST00000216774 CISD3P0C7P0 127 aa12.59□□□□□ -0.39
SRP54-201ENST00000216774 TRAPPC2P0DI81 140 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms