RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 As3mtQ91WU5 376 aa17.45■□□□□ 0.38
Trim47-202ENSMUST00000106441 Pex16Q91XC9 336 aa17.45■□□□□ 0.38
Trim47-202ENSMUST00000106441 Camk2gQ923T9 529 aa17.45■□□□□ 0.38
Trim47-202ENSMUST00000106441 Serpinb1aQ9D154 379 aa17.45■□□□□ 0.38
Trim47-202ENSMUST00000106441 Amdhd1Q9DBA8 426 aa17.45■□□□□ 0.38
Trim47-202ENSMUST00000106441 Mettl15Q9DCL4 406 aa17.45■□□□□ 0.38
Trim47-202ENSMUST00000106441 Olfr49Q9Z1V0 313 aa17.45■□□□□ 0.38
Trim47-202ENSMUST00000106441 DhfrP00375 187 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Hsf2P38533 535 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 StsP50427 624 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Bmp1P98063 991 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 ChatQ03059 641 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Bpifb1Q61114 474 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 NovQ64299 354 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 St8sia4Q64692 359 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Fam149b1Q6NSV7 578 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Cpeb2Q812E0 521 aaKnown RBP17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Atp6v1hQ8BVE3 483 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Q8C3W1 322 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 EndovQ8C9A2 338 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Teddm1bQ8CC62 306 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Ing3Q8VEK6 421 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Olfr308Q8VFP2 308 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Olfr690Q8VH18 315 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Slc25a37Q920G8 338 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 NaaaQ9D7V9 362 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Upk3aQ9JKX8 287 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Slc25a13Q9QXX4 676 aa17.44■□□□□ 0.38
Trim47-202ENSMUST00000106441 Cped1B2RX70 1026 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Efna1P52793 205 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Tia1P52912 386 aaKnown RBP17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Scgb1a1Q06318 96 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Ap5b1Q3TAP4 876 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Slc37a3Q3TIT8 494 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 PfplQ5RKV8 702 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Elavl3Q60900 367 aaKnown RBP17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Olfr1152Q7TR34 310 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Agfg1Q8K2K6 561 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Klhl25Q8R2P1 589 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Olfr1469Q8VFW5 309 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Zswim7Q9CWQ2 152 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 TesminQ9WTJ6 475 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Piezo2Q8CD54 2822 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Rhox2fA2ANE0 191 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 CerklA2AQH1 525 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Vmn1r77E9PY60 306 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Zfp871G5E905 615 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Kpna4O35343 521 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 HpnO35453 436 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Ccnb2P30276 398 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Arpc4P59999 168 aaKnown RBP17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Polr2lP62876 67 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Pyroxd2Q3U4I7 581 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Ccdc177Q3UHB8 706 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Stox2Q499E5 926 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Sema4cQ64151 834 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Ablim3Q69ZX8 682 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 TifaQ793I8 184 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Zfp184Q7TSH9 737 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Q8BH50 245 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Rbm45Q8BHN5 476 aaKnown RBP17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Peli2Q8BST6 419 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Znf786Q8BV42 777 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Calhm5Q8R100 309 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Olfr96Q8VFE3 313 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Acot7Q91V12 381 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Zfand2bQ91X58 257 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Cyp2j9Q924D1 502 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Dnase1l2Q9D1G0 278 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Spo11Q9WTK8 396 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Col6a3E9PWQ3 3284 aa17.43■□□□□ 0.38
Trim47-202ENSMUST00000106441 Vmn1r31L7N2F1 303 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Clcn7O70496 803 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Abcb1aP21447 1276 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Sox6P40645 827 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Ptpn2Q06180 406 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Perm1Q149B8 807 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Dtx3lQ3UIR3 748 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Kbtbd8Q3UQV5 599 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Bod1Q5SQY2 173 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Serpinf2Q61247 491 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Glt8d2Q640P4 349 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Ppp2r1bQ7TNP2 601 aaKnown RBP17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Q8BL95 290 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Slc5a11Q8K0E3 673 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 DhrsxQ8VBZ0 335 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Olfr541Q8VGM0 312 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 9230112D13RikQ9D260 137 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Senp8Q9D2Z4 221 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Trpv4Q9EPK8 871 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Ehd3Q9QXY6 535 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 SrrQ9QZX7 339 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Coro1bQ9WUM3 484 aaKnown RBP17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Loxl3Q9Z175 754 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Tdrd6P61407 2134 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Gm16432A0A0A6YXX9 775 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Gm31371A0A1D5RM70 265 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Reps1O54916 795 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 FiglaO55208 194 aa17.42■□□□□ 0.38
Trim47-202ENSMUST00000106441 Nid1P10493 1245 aa17.42■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms