RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Mterf1aQ8CHZ9 379 aa21.68■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Tmem150bQ8R218 238 aa21.68■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Olfr854Q8VFF1 315 aa21.68■■□□□ 1.06
Upf3a-201ENSMUST00000043767 SharpinQ91WA6 380 aa21.68■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Klk6Q91Y82 253 aa21.68■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Gkn2Q9CQS6 184 aa21.68■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Sugt1Q9CX34 336 aa21.68■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Susd5G3UW60 619 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 InaP46660 501 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Map3k7clP58500 142 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Trim40Q3UWA4 246 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Magee2Q52KG3 523 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Gpr39Q5U431 456 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Gpalpp1Q69ZC8 346 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Fbxl4Q8BH70 621 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Ptbp3Q8BHD7 523 aaKnown RBP21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Ugt2b35Q8BJL9 529 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Ppp1r3eQ8BRJ4 279 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Slc25a45Q8CFJ7 288 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Impa2Q91UZ5 290 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Gadd45gip1Q9CR59 222 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Otud1Q9CUB6 454 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Dcdc2cQ9D1B8 347 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Ascc3E9PZJ8 2198 aaKnown RBP21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 BC034090A0A087WP46 1202 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Gm13420A0A140LJJ2 248 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Lhx8O35652 367 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 EdaO54693 391 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 H2-T23P06339 357 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Cpxcr1Q3V0P1 322 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Abhd16bQ80YU0 474 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Fam92aQ8BP22 355 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Mmp21Q8K3F2 568 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Olfr380Q8VGT3 311 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Rnf144aQ925F3 292 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 PudpQ9D5U5 234 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 CalyQ9DCA7 226 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Hipk3Q9ERH7 1192 aa21.67■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Znf296E9Q6W4 445 aaKnown RBP21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Gabra3P26049 492 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Rps15aP62245 130 aaKnown RBP21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Fam20cQ5MJS3 579 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Slc23a3Q60850 611 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Arl15Q8BGR6 204 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Csnk1g2Q8BVP5 415 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Vps50Q8CI71 964 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 BroxQ8K2Q7 411 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Mmgt2Q8R3L0 123 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Micu1Q8VCX5 477 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Olfr689Q8VG18 320 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Ptov1Q91VU8 416 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Q9CXL3 195 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Prelid3bQ9CYY7 195 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 RgccQ9DBX1 137 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Arr3Q9EQP6 381 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Sh3glb1Q9JK48 365 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Myg1Q9JK81 380 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Oc90Q9Z0L3 485 aa21.66■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Ttc39aA2ACP1 578 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Orm2P07361 207 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Ptpn6P29351 595 aaKnown RBP21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 ThpoP40226 356 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Foxred1Q3TQB2 487 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Zfp280bQ505F4 534 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 FaddQ61160 205 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Cyp20a1Q8BKE6 462 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Bag5Q8CI32 447 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Vmn1r219Q8R271 312 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Olfr551Q8VG23 315 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Clec2fQ8VI21 196 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Oosp1Q925U0 202 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 4921530L21RikQ9CQ47 274 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 CacybpQ9CXW3 229 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Uba2Q9Z1F9 638 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 MgaA2AWL7 3003 aaKnown RBP21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Igkv6-32A0A140T8N9 115 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Vmn2r38G3UYA8 861 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Vmn2r33K7N705 861 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 NapsaO09043 419 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Mtx2O88441 263 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 HbaP01942 142 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Sod1P08228 154 aaKnown RBP21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Slc6a12P31651 614 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 CapzbP47757 277 aaKnown RBP21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Hpcal1P62748 193 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Nfatc3P97305 1075 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 MthfsdQ3URQ7 372 aaKnown RBP21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Bhlha9Q5RJB0 231 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Defa17Q64016 82 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Arrb1Q8BWG8 418 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Nrn1lQ8C4W3 162 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 B3gnt7Q8K0J2 397 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Vmn1r89Q8R256 316 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 HpgdQ8VCC1 269 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Olfr1263Q8VG63 306 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Ints11Q9CWS4 600 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Haus5Q9D786 619 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Usp12Q9D9M2 370 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Cacna1hO88427 2365 aa21.65■■□□□ 1.06
Upf3a-201ENSMUST00000043767 Spin2gA0A0N4SW15 236 aa21.64■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms