RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 DiabloQ9JIQ3 237 aa10.84□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Trbv20A0A0B4J1H5 111 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gm266A6H634 200 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 PbsnO08976 174 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 DdostO54734 441 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 P01664 111 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 FurinP23188 793 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Zfp41Q02526 198 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Dvl3Q61062 716 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Serpina11Q8CIE0 424 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gulp1Q8K2A1 304 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Olfr1302Q8VGE9 315 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Olfr649Q8VGW1 312 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tcam1Q99NB3 548 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Slamf9Q9D780 285 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Rsph9Q9D9V4 276 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Spata19Q9DAQ9 154 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gm3327F7C9A1 213 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gm20503G3UZK1 150 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gdf7P43029 461 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 TshrP47750 764 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gfi1P70338 423 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Arf5P84084 180 aaKnown RBP10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Dusp5Q1HL35 384 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gal3st4Q3V1B8 480 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Slc27a5Q4LDG0 689 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Elavl4Q61701 385 aaKnown RBP10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Zc3hc1Q80YV2 501 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Arl15Q8BGR6 204 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Mal2Q8BI08 175 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tspan12Q8BKT6 305 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Glis1Q8K1M4 789 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Olfr1263Q8VG63 306 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Dnaja4Q9JMC3 397 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Adam25Q9R159 760 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Rasal1Q9Z268 799 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gm10800D3Z496 220 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gsg1lD3Z7H4 322 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Vmn2r8L7N472 848 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Foxq1O70220 400 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Nfkbil1O88995 381 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Hoxd1Q01822 328 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gpbp1l1Q6NZP2 473 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Slc35f1Q8BGK5 408 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Mrpl54Q9CPW3 135 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Khdc3Q9CWU5 440 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Rpl34Q9D1R9 117 aaKnown RBP10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Aph1cQ9DCZ9 258 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tlr1Q9EPQ1 795 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tm9sf3Q9ET30 587 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 PpieQ9QZH3 301 aaKnown RBP10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Nfkb2Q9WTK5 899 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Spaca5A2AE20 160 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Mup18A2BIM8 181 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Olfr631F8VPJ9 319 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Mup11P04938 181 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 SmoP56726 793 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Serpina7P61939 418 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Ap1s1P61967 158 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Entpd6Q3U0P5 455 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gm21320Q4FZE8 181 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Orai1Q8BWG9 304 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Vmn1r219Q8R271 312 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Slco3a1Q8R3L5 710 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 ApofQ91V80 315 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Rbm47Q91WT8 590 aaKnown RBP10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Chmp1b2Q9CQD4 199 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tprg1lQ9DBS2 266 aa10.83□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gm33543A0A1B0GSI5 81 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Hmga1P17095 107 aaKnown RBP10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Irs1P35569 1233 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Neurog1P70660 244 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Bmp1P98063 991 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 RykQ01887 594 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Eml4Q3UMY5 988 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Bpifb1Q61114 474 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Prkg2Q61410 762 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Olfr735Q7TRM4 354 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Scamp1Q8K021 338 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Slc5a11Q8K0E3 673 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Nmral1Q8K2T1 309 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Mnd1Q8K396 205 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 SharpinQ91WA6 380 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Praf2Q9JIG8 178 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 BC034090A0A087WP46 1202 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Igkv5-45A0A0B4J1J1 115 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Olfr1221L7MU53 311 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Chrnb1P09690 501 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Tcf3P15806 651 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Ubl4aP21126 157 aaKnown RBP10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Gja1P23242 382 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Ctbp2P56546 445 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Apoc2Q05020 97 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 PrtgQ2EY15 1191 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Fam105aQ3TVP5 353 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 4933430I17RikQ8BHW4 495 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Baiap2Q8BKX1 535 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Mbtps2Q8CHX6 515 aa10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Nupl2Q8CIC2 420 aaKnown RBP10.82□□□□□ -0.68
Topbp1-201ENSMUST00000035164 Faim2Q8K097 317 aa10.82□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 64.3 ms