RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Pou3f1P21952 449 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Sat1P48026 171 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Lad1P57016 528 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cpt1aP97742 773 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Rspo3Q2TJ95 277 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ube2fbQ3UWQ3 185 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Afg1lQ3V384 480 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Serpinb9fQ80UK5 377 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 GanabQ8BHN3 944 aaKnown RBP16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 OacylQ8BML2 685 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Phtf2Q8CB19 747 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 TifabQ8JZM6 147 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ffar2Q8VCK6 330 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Pskh1Q91YA2 424 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Tram2Q924Z5 370 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Uqcc2Q9CQY6 136 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 TprnA2AI08 749 aaKnown RBP16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Morn1A2RTS7 477 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 FanceB8JJD6 213 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Zfp788E9Q980 884 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Plscr5J3QM92 274 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cyr61P18406 379 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ntf3P20181 258 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Rab23P35288 237 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Btg1P62325 171 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Hif3aQ0VBL6 662 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Lingo4Q149C3 593 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Nell1Q2VWQ2 810 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Palm2Q8BR92 376 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Taf10Q8K0H5 218 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr692Q8VF03 329 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Atp6ap2Q9CYN9 350 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Uqcrc2Q9DB77 453 aaKnown RBP16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Nusap1Q9ERH4 427 aaKnown RBP16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Fgf20Q9ESL9 211 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Tmem236A2ARJ3 344 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Adam3F8VQ03 822 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cldn20G5E8X0 219 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 CyctP00015 105 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cox4i1P19783 169 aaKnown RBP16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Atxn1P54254 791 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 SmoP56726 793 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Rps25P62852 125 aaKnown RBP16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cds1P98191 461 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Wdr75Q3U821 830 aaKnown RBP16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Bcap29Q61334 240 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Meig1Q61845 88 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Tas2r117Q7M715 330 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Slc41a2Q8BYR8 573 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Syn3Q8JZP2 579 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Tnfaip8l1Q8K288 186 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr1052Q8VGR8 312 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 OoepQ9CWE6 164 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Pbld1Q9DCG6 288 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Itgb6Q9Z0T9 787 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cd300cA2A7V7 229 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Stpg3A2RSX4 306 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Zfp277E9Q6D6 583 aaKnown RBP16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Gm8879F6R3J9 157 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Vmn1r14H3BJ46 303 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 OsmrO70458 971 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Prdx3P20108 257 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Dgcr2P98154 548 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 HbegfQ06186 208 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Pgap2Q3TQR0 254 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Tfap2eQ6VUP9 442 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Pcp4l1Q6W8Q3 68 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Pik3ip1Q7TMJ8 264 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Q8C3W1 322 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Chst15Q91XQ5 561 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Qrsl1Q9CZN8 525 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Pex13Q9D0K1 405 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Prkar1aQ9DBC7 381 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 SmpxQ9DC77 85 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Dnaja4Q9JMC3 397 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Vmn1r49Q9WUF1 310 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Uba2Q9Z1F9 638 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr1375A0A0N4SUP0 313 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Vmn1r9A2RST7 299 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Pcdh1F7BJK1 1077 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr1425K7N659 312 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 MaxP28574 160 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Slc6a12P31651 614 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Slc10a2P70172 348 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 CamkmtQ3U2J5 323 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 IppkQ6P1C1 489 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr320Q7TRZ4 306 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 SnupnQ80W37 358 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Q8BH50 245 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Pou6f2Q8BJI4 691 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Gm11541Q8C4D8 108 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Samd14Q8K070 417 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Mettl22Q8R1C6 393 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Taldo1Q93092 337 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Dnase1l2Q9D1G0 278 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Sohlh2Q9D489 467 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Dusp6Q9DBB1 381 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Pole3Q9JKP7 145 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Vps29Q9QZ88 182 aa16.06■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Vmn1r10W4VSP8 311 aa16.06■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms