RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 BUB1O43683 1085 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 MTX2O75431 263 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 OR4F21O95013 312 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 SEC24AO95486 1093 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 ALPLP05186 524 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 GSTA1P08263 222 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 AMD1P17707 334 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 ATP6V1C1P21283 382 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 GLRA1P23415 457 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 PTPN6P29350 595 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 NUCB2P80303 420 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 POU3F1Q03052 451 aaPredicted RBP5.6□□□□□ -1.51
RFC1-217ENST00000639695 TEAD2Q15562 447 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 MAJINQ3KP22 176 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 KIAA1644Q3SXP7 199 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 ZNF311Q5JNZ3 666 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 ZNF790Q6PG37 636 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 PRSS57Q6UWY2 283 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 ERASQ7Z444 233 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 TRPT1Q86TN4 253 aaKnown RBP5.6□□□□□ -1.51
RFC1-217ENST00000639695 FAM131BQ86XD5 332 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 OR10G8Q8NGN5 311 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 RDH11Q8TC12 318 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 ZNRF4Q8WWF5 429 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 P3H4Q92791 437 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 SENP5Q96HI0 755 aaPredicted RBP5.6□□□□□ -1.51
RFC1-217ENST00000639695 PCED1BQ96HM7 432 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 JPH2Q9BR39 696 aaPredicted RBP5.6□□□□□ -1.51
RFC1-217ENST00000639695 TCHPQ9BT92 498 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 PAPOLGQ9BWT3 736 aaKnown RBP5.6□□□□□ -1.51
RFC1-217ENST00000639695 RAB11FIP5Q9BXF6 653 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 MRPL13Q9BYD1 178 aaKnown RBP5.6□□□□□ -1.51
RFC1-217ENST00000639695 GORASP2Q9H8Y8 452 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 SIX2Q9NPC8 291 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 P2RX2Q9UBL9 471 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 FOXJ3Q9UPW0 622 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 WIPI2Q9Y4P8 454 aa5.6□□□□□ -1.51
RFC1-217ENST00000639695 PTPRUQ92729 1446 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 TRIP12Q14669 1992 aaPredicted RBP5.59□□□□□ -1.51
RFC1-217ENST00000639695 A8MUI8 341 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 PRR23D1E9PI22 279 aaPredicted RBP5.59□□□□□ -1.51
RFC1-217ENST00000639695 E9PMD0 336 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 LMO7DNF2Z398 122 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 SGK494L7N484 410 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 UBXN8O00124 270 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 CFLARO15519 480 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 CLPTM1O96005 669 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 CRYAAP02489 173 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 PRR23D2P0DMB1 279 aaPredicted RBP5.59□□□□□ -1.51
RFC1-217ENST00000639695 CLUP10909 449 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 DRD5P21918 477 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 PTGFRP43088 359 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 BTG1P62324 171 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 HERVK_113P63132 956 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 ERVK-8P63133 956 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 PDK4Q16654 411 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 RFTN2Q52LD8 501 aaPredicted RBP5.59□□□□□ -1.51
RFC1-217ENST00000639695 SPANXN4Q5MJ08 99 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 C9orf139Q6ZV77 190 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 SH2D5Q6ZV89 423 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 Q6ZVQ6 151 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 Q71RC1 249 aaPredicted RBP5.59□□□□□ -1.51
RFC1-217ENST00000639695 LINC00518Q8N0U6 118 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 LSMEM2Q8N112 164 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 ZNF843Q8N446 348 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 COG3Q96JB2 828 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 VPS35Q96QK1 796 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 DCTN5Q9BTE1 182 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 ERVK-6Q9BXR3 956 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 ATP13A3Q9H7F0 1226 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 LRRC40Q9H9A6 602 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 MAN2C1Q9NTJ4 1040 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 MIOXQ9UGB7 285 aa5.59□□□□□ -1.51
RFC1-217ENST00000639695 IQCMA0A1B0GVH7 501 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 SHISA7A6NL88 538 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 CCDC169A6NNP5 214 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 SRRM4A7MD48 611 aaKnown RBP5.58□□□□□ -1.52
RFC1-217ENST00000639695 FGF17O60258 216 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 CDC123O75794 336 aaPredicted RBP5.58□□□□□ -1.52
RFC1-217ENST00000639695 KIAA0754O94854 1291 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 NDUFA7O95182 113 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 PRSS1P07477 247 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 FAM157CP0CG43 387 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 RPA2P15927 270 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 MARK3P27448 753 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 SOX3P41225 446 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 FHITP49789 147 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 BACE1P56817 501 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 ABCE1P61221 599 aaKnown RBP5.58□□□□□ -1.52
RFC1-217ENST00000639695 TRIP10Q15642 601 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 ZSWIM7Q19AV6 140 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 PARP6Q2NL67 630 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 CCDC57Q2TAC2 916 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 ZNF528Q3MIS6 628 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 GTDC1Q4AE62 458 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 SLC35E4Q6ICL7 350 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 NIPAL3Q6P499 406 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.58□□□□□ -1.52
RFC1-217ENST00000639695 CHMP1BQ7LBR1 199 aa5.58□□□□□ -1.52
RFC1-217ENST00000639695 LRRC70Q7Z2Q7 622 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms