RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 FGD2Q7Z6J4 655 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 ZDHHC21Q8IVQ6 265 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 NAXDQ8IW45 347 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 OR13C4Q8NGS5 318 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 PSMG2Q969U7 264 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 MYEOVQ96EZ4 313 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 SCRN2Q96FV2 425 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 PYURFQ96I23 114 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 ACBD6Q9BR61 282 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 SORBS1Q9BX66 1292 aaKnown RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 QRSL1Q9H0R6 528 aaKnown RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 OR51J1Q9H342 316 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 PPP1R3EQ9H7J1 279 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 ZNF334Q9HCZ1 680 aaPredicted RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 DLL4Q9NR61 685 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 IMP3Q9NV31 184 aaKnown RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 UXTQ9UBK9 157 aaPredicted RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 LRFN2Q9ULH4 789 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 SSR3Q9UNL2 185 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 CBY1Q9Y3M2 126 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 NEUROG3Q9Y4Z2 214 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 DMRT1Q9Y5R6 373 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 AP1M2Q9Y6Q5 423 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 ISM1B1AKI9 464 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 LGALS8O00214 317 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 RAD1O60671 282 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 GNRH1P01148 92 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 CYP17A1P05093 508 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 SULT1A3P0DMM9 295 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 SULT1A4P0DMN0 295 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 ITPKAP23677 461 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 PSMA1P25786 263 aaKnown RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 DDX6P26196 483 aaKnown RBP eCLIP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 RIDAP52758 137 aaKnown RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 RPS7P62081 194 aaKnown RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 ST3GAL4Q11206 333 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 MAP4K2Q12851 820 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 KCNAB1Q14722 419 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 PLA1AQ53H76 456 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 SPIN4Q56A73 249 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 VASNQ6EMK4 673 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 C3orf33Q6P1S2 294 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 GCNT7Q6ZNI0 430 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 ZNF605Q86T29 641 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 SLC9B2Q86UD5 537 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 FTMTQ8N4E7 242 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 DENND6BQ8NEG7 585 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 OR2T11Q8NH01 316 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 GLYATL2Q8WU03 294 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 EDARADDQ8WWZ3 215 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 IGSF8Q969P0 613 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 TADA1Q96BN2 335 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 PPM1MQ96MI6 270 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 SMIM14Q96QK8 99 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 ATOH8Q96SQ7 321 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 CPEB1Q9BZB8 566 aaKnown RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 SEMA4CQ9C0C4 833 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 C11orf49Q9H6J7 331 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 SEBOXQ9HB31 216 aaPredicted RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 PRDM5Q9NQX1 630 aaPredicted RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 KLHL1Q9NR64 748 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 NDUFAF4Q9P032 175 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 CPA4Q9UI42 421 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 FBXL2Q9UKC9 423 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 TRPV2Q9Y5S1 764 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 ANKRD12Q6UB98 2062 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 CREG1O75629 220 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 ZDHHC11BP0C7U3 371 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 RNF224P0DH78 156 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 PIPP12273 146 aaPredicted RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 OGNP20774 298 aaKnown RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 ACADLP28330 430 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 PRDX3P30048 256 aaKnown RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 GPX4P36969 197 aaPredicted RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 ACVRL1P37023 503 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 MMP12P39900 470 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 ITGA1P56199 1179 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 UFM1P61960 85 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 AP1S1P61966 158 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 RPL6Q02878 288 aaKnown RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 HNRNPA0Q13151 305 aaKnown RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 MED22Q15528 200 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 TAF1AQ15573 450 aaPredicted RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 FAM110CQ1W6H9 321 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 ARHGAP15Q53QZ3 475 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 CARD16Q5EG05 197 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 XKR7Q5GH72 579 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 MS4A13Q5J8X5 152 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 MORN1Q5T089 497 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 AVPI1Q5T686 147 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 BCL2L15Q5TBC7 163 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 OVOS1Q6IE37 1185 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 HAGHLQ6PII5 290 aaPredicted RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 SCIMPQ6UWF3 145 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 WASH2PQ6VEQ5 465 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 CEP68Q76N32 757 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 TRMT11Q7Z4G4 463 aaKnown RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 DENND1CQ8IV53 801 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 CCDC116Q8IYX3 515 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 UMODL1-AS1Q8N2C9 162 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms