RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 GOT1L1Q8NHS2 421 aaPredicted RBP9.9□□□□□ -0.82
VPS11-207ENST00000620429 PROKR1Q8TCW9 393 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 SCARB1Q8WTV0 552 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 RNF32Q9H0A6 362 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 SEBOXQ9HB31 216 aaPredicted RBP9.9□□□□□ -0.82
VPS11-207ENST00000620429 B3GAT2Q9NPZ5 323 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 PDP1Q9P0J1 537 aaPredicted RBP9.9□□□□□ -0.82
VPS11-207ENST00000620429 MALT1Q9UDY8 824 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 GPR160Q9UJ42 338 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 ST3GAL5Q9UNP4 418 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 PPIEQ9UNP9 301 aaKnown RBP9.9□□□□□ -0.82
VPS11-207ENST00000620429 NPTNQ9Y639 398 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 DENND4AQ7Z401 1863 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 ISM1B1AKI9 464 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 CDC7O00311 574 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 SLC7A4O43246 635 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 OGNP20774 298 aaKnown RBP9.9□□□□□ -0.83
VPS11-207ENST00000620429 ITPKAP23677 461 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 CD96P40200 585 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 RPS7P62081 194 aaKnown RBP9.9□□□□□ -0.83
VPS11-207ENST00000620429 PPP3R1P63098 170 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 LCP2Q13094 533 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 ERV3-1Q14264 604 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 LAPTM4AQ15012 233 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 BCL2L15Q5TBC7 163 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 FAM198BQ6UWH4 519 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 WDR20Q8TBZ3 569 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 TMEM209Q96SK2 561 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 TCEAL7Q9BRU2 100 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 FAM126AQ9BYI3 521 aaPredicted RBP9.9□□□□□ -0.83
VPS11-207ENST00000620429 OR51J1Q9H342 316 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 MPP6Q9NZW5 540 aa9.9□□□□□ -0.83
VPS11-207ENST00000620429 PDCD11Q14690 1871 aaKnown RBP9.89□□□□□ -0.83
VPS11-207ENST00000620429 MYBPHLA2RUH7 354 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 CASTOR2A6NHX0 329 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 G3V3Q6 166 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 VIPP01282 170 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 SULT1A3P0DMM9 295 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 SULT1A4P0DMN0 295 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 GABRB1P18505 474 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 SDC2P34741 201 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 PBX3P40426 434 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 SMSP52788 366 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 MAXP61244 160 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 FOXK2Q01167 660 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 DHODHQ02127 395 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 SERTAD2Q14140 314 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 DMC1Q14565 340 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 TAF1AQ15573 450 aaPredicted RBP9.89□□□□□ -0.83
VPS11-207ENST00000620429 FBXO39Q8N4B4 442 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 FTMTQ8N4E7 242 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 DENND6BQ8NEG7 585 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 OTULINQ96BN8 352 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 OTUB1Q96FW1 271 aaPredicted RBP9.89□□□□□ -0.83
VPS11-207ENST00000620429 CRISPLD2Q9H0B8 497 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 AGO3Q9H9G7 860 aaKnown RBP9.89□□□□□ -0.83
VPS11-207ENST00000620429 SLC22A11Q9NSA0 550 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 SEC14L3Q9UDX4 400 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 KCTD3Q9Y597 815 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 DNMT3AQ9Y6K1 912 aaPredicted RBP9.89□□□□□ -0.83
VPS11-207ENST00000620429 LCHNA4D1U4 455 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 CDRT1O95170 752 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 KLK3P07288 261 aaPredicted RBP9.89□□□□□ -0.83
VPS11-207ENST00000620429 CKMT1AP12532 417 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 FDXRP22570 491 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 PRDX3P30048 256 aaKnown RBP9.89□□□□□ -0.83
VPS11-207ENST00000620429 LCN1P31025 176 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 HOXC8P31273 242 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 ACSL1P33121 698 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 CD86P42081 329 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 KCNJ3P48549 501 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 MRPS6P82932 125 aaKnown RBP9.89□□□□□ -0.83
VPS11-207ENST00000620429 HNRNPA0Q13151 305 aaKnown RBP9.89□□□□□ -0.83
VPS11-207ENST00000620429 SNTB1Q13884 538 aaKnown RBP9.89□□□□□ -0.83
VPS11-207ENST00000620429 PTPRCAPQ14761 206 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 B3GNTL1Q67FW5 361 aaPredicted RBP9.89□□□□□ -0.83
VPS11-207ENST00000620429 ANKS6Q68DC2 871 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 ZNF549Q6P9A3 640 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 ZNF605Q86T29 641 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 ZNF454Q8N9F8 522 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 OR10A6Q8NH74 314 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 AP3S1Q92572 193 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 PCED1BQ96HM7 432 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 ATOH8Q96SQ7 321 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 PKMYT1Q99640 499 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 MYOCQ99972 504 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 MFSD1Q9H3U5 465 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 CDCP1Q9H5V8 836 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 ZNF334Q9HCZ1 680 aaPredicted RBP9.89□□□□□ -0.83
VPS11-207ENST00000620429 NT5MQ9NPB1 228 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 CNOT2Q9NZN8 540 aaKnown RBP9.89□□□□□ -0.83
VPS11-207ENST00000620429 ZNF451Q9Y4E5 1061 aa9.89□□□□□ -0.83
VPS11-207ENST00000620429 GFRA2O00451 464 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 ATG12O94817 140 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 IGHA2P01877 340 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 HIST1H2AGP0C0S8 130 aaPredicted RBP9.88□□□□□ -0.83
VPS11-207ENST00000620429 SPP1P10451 314 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 HIST1H2ADP20671 130 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 CCR1P32246 355 aa9.88□□□□□ -0.83
VPS11-207ENST00000620429 INPP1P49441 399 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms