RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 PORCNQ9H237 461 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 LINC00597Q9H2U6 94 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 TXNL4BQ9NX01 149 aaKnown RBP11.73□□□□□ -0.53
MATR3-227ENST00000618441 SLC25A37Q9NYZ2 338 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 NLGN3Q9NZ94 848 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 UBQLN1Q9UMX0 589 aaKnown RBP11.73□□□□□ -0.53
MATR3-227ENST00000618441 NRCAMQ92823 1304 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 ARHGEF33A8MVX0 844 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 CLDN5O00501 218 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 HCN1O60741 890 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 CD1DP15813 335 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 CNR2P34972 360 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 PBX3P40426 434 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 DEFA6Q01524 100 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 PUM1Q14671 1186 aaKnown RBP eCLIP11.72□□□□□ -0.533e-9■□□□□ 10
MATR3-227ENST00000618441 MELKQ14680 651 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 MARCH8Q5T0T0 291 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 MIB1Q86YT6 1006 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 OR8J3Q8NGG0 315 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 MAL2Q969L2 176 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 DPAGT1Q9H3H5 408 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 ZNF275Q9NSD4 429 aaPredicted RBP11.72□□□□□ -0.53
MATR3-227ENST00000618441 LYARQ9NX58 379 aaKnown RBP11.72□□□□□ -0.53
MATR3-227ENST00000618441 SPHK1Q9NYA1 384 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 IL20Q9NYY1 176 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 B4GALT3O60512 393 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 ENTPD6O75354 484 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 PIGRP01833 764 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 STAG3L1P0CL83 205 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 SPP1P10451 314 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 CASP6P55212 293 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 WNT3AP56704 352 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 SMAD2Q15796 467 aaKnown RBP11.72□□□□□ -0.53
MATR3-227ENST00000618441 LY6KQ17RY6 165 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 GLYR1Q49A26 553 aaPredicted RBP11.72□□□□□ -0.53
MATR3-227ENST00000618441 OR2G6Q5TZ20 316 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 C11orf88Q6PI97 169 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 Q6ZSR9 355 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 MARCH9Q86YJ5 346 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 MEIOBQ8N635 442 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 KHSRPQ92945 711 aaKnown RBP eCLIP11.72□□□□□ -0.531e-7■■■□□ 18.3
MATR3-227ENST00000618441 C12orf42Q96LP6 360 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 SAMD11Q96NU1 681 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 PANX1Q96RD7 426 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 GINS4Q9BRT9 223 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 DUSP16Q9BY84 665 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 FLRT1Q9NZU1 646 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 MKI67P46013 3256 aaKnown RBP11.72□□□□□ -0.53
MATR3-227ENST00000618441 TRABD2BA6NFA1 517 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 DNASE2O00115 360 aaPredicted RBP11.72□□□□□ -0.53
MATR3-227ENST00000618441 GPR31O00270 319 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 PIAS2O75928 621 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 CCNDBP1O95273 360 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 GLP2RO95838 553 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 TFP02787 698 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 HLA-EP13747 358 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 GDF5P43026 501 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 CPSF6Q16630 551 aaKnown RBP eCLIP11.72□□□□□ -0.53
MATR3-227ENST00000618441 ATP13A5Q4VNC0 1218 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 ANKRD39Q53RE8 183 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 GPR149Q86SP6 731 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 CBARPQ8N350 705 aaPredicted RBP11.72□□□□□ -0.53
MATR3-227ENST00000618441 TRMT10AQ8TBZ6 339 aaKnown RBP11.72□□□□□ -0.53
MATR3-227ENST00000618441 GPR152Q8TDT2 470 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 UCN3Q969E3 161 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 KLHL5Q96PQ7 755 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 FDXACB1Q9BRP7 624 aaPredicted RBP11.72□□□□□ -0.53
MATR3-227ENST00000618441 MED18Q9BUE0 208 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 PIGVQ9NUD9 493 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 MGAT4CQ9UBM8 478 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 SRRDQ9UH36 339 aa11.72□□□□□ -0.53
MATR3-227ENST00000618441 ZNF670-ZNF695F2Z2N8 137 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 FAM227AF5H4B4 570 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 SMPD1P17405 629 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 FPR3P25089 353 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 MMP12P39900 470 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 XKP51811 444 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 ITGA1P56199 1179 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 AP1S2P56377 157 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 ZNF280AP59817 542 aaPredicted RBP11.71□□□□□ -0.53
MATR3-227ENST00000618441 NFKB2Q00653 900 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 TMEM132DQ14C87 1099 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 ABRAXAS2Q15018 415 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 MPEG1Q2M385 716 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 FBXO16Q8IX29 292 aaPredicted RBP11.71□□□□□ -0.53
MATR3-227ENST00000618441 ADGRF3Q8IZF5 1079 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 CPNE2Q96FN4 548 aaPredicted RBP11.71□□□□□ -0.53
MATR3-227ENST00000618441 MS4A3Q96HJ5 214 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 CAMK1GQ96NX5 476 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 SLC38A2Q96QD8 506 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 MARVELD1Q9BSK0 173 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 ARHGAP39Q9C0H5 1083 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 GTF2IRD1Q9UHL9 959 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 ASB1Q9Y576 335 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 SLC7A4O43246 635 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 SUV39H1O43463 412 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 SDC3O75056 442 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 NDUFS3O75489 264 aa11.71□□□□□ -0.53
MATR3-227ENST00000618441 KHDRBS3O75525 346 aaKnown RBP11.71□□□□□ -0.53
MATR3-227ENST00000618441 PFKMP08237 780 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms