RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-223ENST00000604624 SUMO1P63165 101 aaKnown RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 AUHQ13825 339 aaKnown RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 LRIF1Q5T3J3 769 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 C9orf131Q5VYM1 1079 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 ASCC1Q8N9N2 400 aaKnown RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 NLGN4YQ8NFZ3 816 aaPredicted RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 GTF3C2Q8WUA4 911 aaPredicted RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 DNAJB3Q8WWF6 145 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 SLC5A5Q92911 643 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 RDH12Q96NR8 316 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 IL12RB2Q99665 862 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 SEMA4CQ9C0C4 833 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 PURGQ9UJV8 347 aaKnown RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 PCDHB10Q9UN67 800 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 FBLL1A6NHQ2 334 aaKnown RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 CRTAPO75718 401 aaPredicted RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 SOX14O95416 240 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 SOX2P48431 317 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 CASP6P55212 293 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 KCNC4Q03721 635 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 NDUFAF5Q5TEU4 345 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 ALDH16A1Q8IZ83 802 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 NLGN4XQ8N0W4 816 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 OR4K15Q8NH41 348 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 FAM131CQ96AQ9 280 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 ADGRG7Q96K78 797 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 GPA33Q99795 319 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 FOXC2Q99958 501 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 DUSP16Q9BY84 665 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 NXF2Q9GZY0 626 aaKnown RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 CISHQ9NSE2 258 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 TAS2R9Q9NYW1 312 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 PIM2Q9P1W9 311 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 CD84Q9UIB8 345 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 DOPEY1Q5JWR5 2465 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 A0A0U1RQJ8 604 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 SOX1O00570 391 aaPredicted RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 DLGAP1O14490 977 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 UBFD1O14562 309 aaKnown RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 IRF6O14896 467 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 SEC14L5O43304 696 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 LDB2O43679 373 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 TOX4O94842 621 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 BDNFP23560 247 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 CERS1P27544 350 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 MAT2AP31153 395 aaKnown RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 ETV3P41162 512 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 NUDT6P53370 316 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 FMR1Q06787 632 aaKnown RBP eCLIP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 C3orf38Q5JPI3 329 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 BCL2L15Q5TBC7 163 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 CAPN13Q6MZZ7 669 aaPredicted RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 HSD17B13Q7Z5P4 300 aaPredicted RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 S100A7AQ86SG5 101 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 ZNF679Q8IYX0 411 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 C1orf87Q8N0U7 546 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 BANPQ8N9N5 519 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 MFSD9Q8NBP5 474 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 FAM156AQ8NDB6 213 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 SETD7Q8WTS6 366 aaKnown RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 C7orf43Q8WVR3 580 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 SLC5A11Q8WWX8 675 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 PHOX2BQ99453 314 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 C14orf119Q9NWQ9 140 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 CALML5Q9NZT1 146 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 DLGAP4Q9Y2H0 992 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 LTN1O94822 1766 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 TRAV19A0A0A6YYK7 116 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 PRAMEF22A3QJZ6 481 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 ZNF99A8MXY4 864 aaPredicted RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 B4DGG1 531 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 C9J4A7 227 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 ITM2AO43736 263 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 GLI1P08151 1106 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 SMIM17P0DL12 118 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 YBX3P16989 372 aaKnown RBP eCLIP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 ATP5C1P36542 298 aaKnown RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 AIF1P55008 147 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 AQP4P55087 323 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 TAP2Q03519 686 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 TNK1Q13470 666 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 SNAPC2Q13487 334 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 CRMP1Q14194 572 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 NFE2Q16621 373 aaPredicted RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 NKPD1Q17RQ9 610 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 BEST4Q8NFU0 473 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 NEIL3Q8TAT5 605 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 FOXJ1Q92949 421 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 CD180Q99467 661 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 PIP5K1AQ99755 562 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 MRPL13Q9BYD1 178 aaKnown RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 FAM234AQ9H0X4 552 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 ANKHQ9HCJ1 492 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 DNPEPQ9ULA0 475 aa3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 DNMT3AQ9Y6K1 912 aaPredicted RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 DDX60Q8IY21 1712 aaKnown RBP3.93□□□□□ -1.78
KCNMA1-223ENST00000604624 A0A0D9SG52 128 aa3.92□□□□□ -1.78
KCNMA1-223ENST00000604624 A0A1W2PQ67 120 aa3.92□□□□□ -1.78
KCNMA1-223ENST00000604624 NDUFS4O43181 175 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms