RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 CLEC6AQ6EIG7 209 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 GALNT18Q6P9A2 607 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 C16orf47Q6ZP98 133 aaPredicted RBP14.65□□□□□ -0.06
RPS28-203ENST00000600659 ZCCHC23Q6ZST2 131 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 TRIM46Q7Z4K8 759 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 ST13P4Q8IZP2 240 aaPredicted RBP14.65□□□□□ -0.06
RPS28-203ENST00000600659 DOK4Q8TEW6 326 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 DAZLQ92904 295 aaKnown RBP14.65□□□□□ -0.06
RPS28-203ENST00000600659 SCMH1Q96GD3 660 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 DEFB126Q9BYW3 111 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 IQCGQ9H095 443 aaKnown RBP14.65□□□□□ -0.06
RPS28-203ENST00000600659 TUBB1Q9H4B7 451 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 SIRT5Q9NXA8 310 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 MCM8Q9UJA3 840 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 PCDHA9Q9Y5H5 950 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 CLCA3PQ9Y6N3 262 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 CLEC18AA5D8T8 446 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 NPIPB8E9PQR5 432 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 RGS16O15492 202 aaPredicted RBP14.64□□□□□ -0.07
RPS28-203ENST00000600659 NPHS1O60500 1241 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 PRAMEF2O60811 474 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 BPGMP07738 259 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 UQCRHP07919 91 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 CT62P0C5K7 136 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 DHRS4L1P0CG22 281 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 HK2P52789 917 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 PLIN5Q00G26 463 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 MPP2Q14168 576 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 ZNF750Q32MQ0 723 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 CFAP157Q5JU67 520 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 ZNF324BQ6AW86 544 aaPredicted RBP14.64□□□□□ -0.07
RPS28-203ENST00000600659 SPINK14Q6IE38 97 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 SLC48A1Q6P1K1 146 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 CLEC18BQ6UXF7 455 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 LRIG3Q6UXM1 1119 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 RNF165Q6ZSG1 346 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 C9orf40Q8IXQ3 194 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 CLEC18CQ8NCF0 446 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 GALNT11Q8NCW6 608 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 GRHL3Q8TE85 626 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 THAP3Q8WTV1 239 aaPredicted RBP14.64□□□□□ -0.07
RPS28-203ENST00000600659 PGM2Q96G03 612 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 DGAT2Q96PD7 388 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 TRMOQ9BU70 441 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 OR8D2Q9GZM6 311 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 LIN28AQ9H9Z2 209 aaKnown RBP14.64□□□□□ -0.07
RPS28-203ENST00000600659 SSU72Q9NP77 194 aaKnown RBP14.64□□□□□ -0.07
RPS28-203ENST00000600659 HEY2Q9UBP5 337 aa14.64□□□□□ -0.07
RPS28-203ENST00000600659 DOPEY2Q9Y3R5 2298 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 C1orf226A1L170 272 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 TMEM233B4DJY2 109 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 PCDH7O60245 1069 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 ITGA10O75578 1167 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 SLC35E2P0CK97 266 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 UROSP10746 265 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 GNLYP22749 145 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 TIA1P31483 386 aaKnown RBP eCLIP14.63□□□□□ -0.077e-13■■■■■ 30.1
RPS28-203ENST00000600659 GALNSP34059 522 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 TDGF1P3P51864 188 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 TRA2BP62995 288 aaKnown RBP14.63□□□□□ -0.07
RPS28-203ENST00000600659 RNF4P78317 190 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 BIKQ13323 160 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 KIAA0040Q15053 153 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 OR1C1Q15619 314 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 INAQ16352 499 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 UGT3A2Q3SY77 523 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 SPIN4Q56A73 249 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 ARL13AQ5H913 290 aaPredicted RBP14.63□□□□□ -0.07
RPS28-203ENST00000600659 ZNF766Q5HY98 468 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 KANK2Q63ZY3 851 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 Q6ZSR9 355 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 OR2T11Q8NH01 316 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 OR8K3Q8NH51 312 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.63□□□□□ -0.07
RPS28-203ENST00000600659 SENP5Q96HI0 755 aaPredicted RBP14.63□□□□□ -0.07
RPS28-203ENST00000600659 FBXL20Q96IG2 436 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 PKNOX2Q96KN3 472 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 ZNF681Q96N22 645 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 SLX1AQ9BQ83 275 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 UTP23Q9BRU9 249 aaKnown RBP14.63□□□□□ -0.07
RPS28-203ENST00000600659 EBPLQ9BY08 206 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.63□□□□□ -0.071e-6■■□□□ 11.9
RPS28-203ENST00000600659 RRAGDQ9NQL2 400 aaPredicted RBP14.63□□□□□ -0.07
RPS28-203ENST00000600659 NMRK1Q9NWW6 199 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 PCDHGB6Q9Y5F9 930 aa14.63□□□□□ -0.07
RPS28-203ENST00000600659 COPG1Q9Y678 874 aaKnown RBP14.63□□□□□ -0.07
RPS28-203ENST00000600659 CDK2AP1O14519 115 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 AZIN1O14977 448 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 WISP2O76076 250 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 ZFAND5O76080 213 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 CBX6O95503 412 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 IL3P08700 152 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 CPMP14384 443 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 PRPH2P23942 346 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 HLCSP50747 726 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 ERVK-8P63133 956 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 PMP22Q01453 160 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 KCNC4Q03721 635 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 ACSM2AQ08AH3 577 aa14.62□□□□□ -0.07
RPS28-203ENST00000600659 MRPL49Q13405 166 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms