RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 TDRKHQ9Y2W6 561 aaKnown RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 CHD8Q9HCK8 2581 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 SETXQ7Z333 2677 aaKnown RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 ZZEF1O43149 2961 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 BPTFQ12830 3046 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 TMEM131Q92545 1883 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 ITPR1Q14643 2758 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 SYNJ2BP-COX16A0A087WUM0 186 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 SPAARA0A1B0GVQ0 90 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 MAP2K7O14733 419 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 SPTBN2O15020 2390 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 MSH4O15457 936 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 B4GALT5O43286 388 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 RIPK2O43353 540 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 SYNGR3O43761 229 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 NOL3O60936 208 aaKnown RBP3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 PEX11AO75192 247 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 MOCS3O95396 460 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 BAG4O95429 457 aaKnown RBP3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 SEC24AO95486 1093 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 ACSL3O95573 720 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 APBB3O95704 486 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 ABHD2P08910 425 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 ZNF806P0C7X5 589 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 C8orf89P0DMQ9 161 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 CCDC192P0DO97 292 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 ETS1P14921 441 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 PAX1P15863 534 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 AHCYP23526 432 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 FCARP24071 287 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 HRH2P25021 359 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 FRKP42685 505 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 ACAA2P42765 397 aaKnown RBP3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 BRCC3P46736 316 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 RPS9P46781 194 aaKnown RBP3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 IFNAR2P48551 515 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 HOXA1P49639 335 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 CD81P60033 236 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 POLR2LP62875 67 aaKnown RBP3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 KCNJ10P78508 379 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 TP53BP1Q12888 1972 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 HSPB3Q12988 150 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 PSMD5Q16401 504 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 MRGPRG-AS1Q2M3A8 158 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 LIN9Q5TKA1 542 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 TXNRD3NBQ6F5E7 133 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 FIGLAQ6QHK4 219 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 MFSD7Q6UXD7 560 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 RGS9BPQ6ZS82 235 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 ANO5Q75V66 913 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 DET1Q7L5Y6 550 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 MIER3Q7Z3K6 550 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 ADCK1Q86TW2 530 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 CCDC190Q86UF4 302 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 LONP2Q86WA8 852 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 MARCH9Q86YJ5 346 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 SERPINA12Q8IW75 414 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 CCDC83Q8IWF9 413 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 PM20D2Q8IYS1 436 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 GBGT1Q8N5D6 347 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 DEFB119Q8N690 84 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 EMC1Q8N766 993 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 FBXO30Q8TB52 745 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 SPATA18Q8TC71 538 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 ZNF524Q96C55 264 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 SPDL1Q96EA4 605 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 OXNAD1Q96HP4 312 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 TMEM175Q9BSA9 504 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 CRACR2AQ9BSW2 395 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 NXF3Q9H4D5 531 aaKnown RBP3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 TRPC7Q9HCX4 862 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 SCRT2Q9NQ03 307 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 AGPAT5Q9NUQ2 364 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 GTSE1Q9NYZ3 720 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 VPS18Q9P253 973 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 WRAP73Q9P2S5 460 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 ADAM28Q9UKQ2 775 aa3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 TMEM184BQ9Y519 407 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P6-201ENST00000569046 SDK1Q7Z5N4 2213 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 ABCA7Q8IZY2 2146 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 CITO14578 2027 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 MYH11P35749 1972 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 ELOVL7A1L3X0 281 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 HEPACAM2A8MVW5 462 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 CLDN4O14493 209 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 PRKNO60260 465 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 TSPAN1O60635 241 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 ZG16O60844 167 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 ZNF217O75362 1048 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 ECI2O75521 394 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 ERLIN2O94905 339 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 SNX4O95219 450 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 TDP2O95551 362 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 TGFAP01135 160 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 RAB40ALP0C0E4 278 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 DANCRP0C864 163 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 ACAT1P24752 427 aaKnown RBP3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 PSMB4P28070 264 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 CDKN1AP38936 164 aa3.05□□□□□ -1.92
HMGB1P6-201ENST00000569046 IRX4P78413 519 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms