RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 POLR2J3Q9H1A7 115 aaKnown RBP20.53■□□□□ 0.88
SPSB3-208ENST00000566339 ANKRA2Q9H9E1 313 aa20.53■□□□□ 0.88
SPSB3-208ENST00000566339 FGF20Q9NP95 211 aaPredicted RBP20.53■□□□□ 0.88
SPSB3-208ENST00000566339 KLHL20Q9Y2M5 609 aa20.53■□□□□ 0.88
SPSB3-208ENST00000566339 INSL5Q9Y5Q6 135 aa20.53■□□□□ 0.88
SPSB3-208ENST00000566339 TRBV4-1A0A0J9YWV2 114 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 KRT87PA6NCN2 255 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 B4DXG7 233 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 POLR1CO15160 346 aaPredicted RBP20.52■□□□□ 0.88
SPSB3-208ENST00000566339 C1orf105O95561 183 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 SOAT1P35610 550 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 SOX3P41225 446 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 BDKRB1P46663 353 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 LIM2P55344 173 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 TAS2R50P59544 299 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 RIN1Q13671 783 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 QPRTQ15274 297 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 PPP2R2DQ66LE6 453 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 PGBD2Q6P3X8 592 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 OTOP2Q7RTS6 562 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 NRSN1Q8IZ57 195 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 CIDECQ96AQ7 238 aaPredicted RBP20.52■□□□□ 0.88
SPSB3-208ENST00000566339 TMEM169Q96HH4 297 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 IL4I1Q96RQ9 567 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 ZNF607Q96SK3 696 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 ZNF334Q9HCZ1 680 aaPredicted RBP20.52■□□□□ 0.88
SPSB3-208ENST00000566339 TESQ9UGI8 421 aaKnown RBP20.52■□□□□ 0.88
SPSB3-208ENST00000566339 CLEC4EQ9ULY5 219 aa20.52■□□□□ 0.88
SPSB3-208ENST00000566339 H3BM21 787 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 TSPAN6O43657 245 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 MMP20O60882 483 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 GUCY1B2O75343 617 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 KLHL18O94889 574 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 CDRT1O95170 752 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 CSF3P09919 207 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 CTSAP10619 480 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 NPPBP16860 134 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 FGF9P31371 208 aaPredicted RBP20.51■□□□□ 0.87
SPSB3-208ENST00000566339 KCNJ5P48544 419 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 TBPL1P62380 186 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 C19orf57Q0VDD7 668 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 TP53BP2Q13625 1128 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 DUSP7Q16829 419 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 TRIM60Q495X7 471 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 LCN1P1Q5VSP4 162 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 NXPE4Q6UWF7 544 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 HSD11B1LQ7Z5J1 315 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 ZNF480Q8WV37 535 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 NR4A3Q92570 626 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 GLYATL1Q969I3 302 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 NELL2Q99435 816 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 MIXL1Q9H2W2 232 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 C11orf16Q9NQ32 467 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 CFAP97Q9P2B7 532 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 PLEKHB1Q9UF11 243 aaPredicted RBP20.51■□□□□ 0.87
SPSB3-208ENST00000566339 CLEC2DQ9UHP7 191 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 ACSL6Q9UKU0 697 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 GSTK1Q9Y2Q3 226 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 PCDHGB7Q9Y5F8 929 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 SZT2Q5T011 3432 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 A0A1W2PRQ8 180 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 TNFRSF10AO00220 468 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 NR2F6P10588 404 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 GSTM3P21266 225 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 CFL1P23528 166 aaKnown RBP20.51■□□□□ 0.87
SPSB3-208ENST00000566339 SDC2P34741 201 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 CTSOP43234 321 aaPredicted RBP20.51■□□□□ 0.87
SPSB3-208ENST00000566339 STK19P49842 368 aaPredicted RBP20.51■□□□□ 0.87
SPSB3-208ENST00000566339 CNTN1Q12860 1018 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 CAMK2BQ13554 666 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 ZNF658BQ4V348 819 aaPredicted RBP20.51■□□□□ 0.87
SPSB3-208ENST00000566339 ZNF628Q5EBL2 1059 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 TXNDC8Q6A555 127 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 ADNP2Q6IQ32 1131 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 TCTN3Q6NUS6 607 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 LAPTM4BQ86VI4 370 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 VANGL1Q8TAA9 524 aaPredicted RBP20.51■□□□□ 0.87
SPSB3-208ENST00000566339 SLC5A11Q8WWX8 675 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 SLC6A18Q96N87 628 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 PRM3Q9NNZ6 103 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 ABCB9Q9NP78 766 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 MIEF1Q9NQG6 463 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 DNAJC27Q9NZQ0 273 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 CD84Q9UIB8 345 aa20.51■□□□□ 0.87
SPSB3-208ENST00000566339 HEPACAM2A8MVW5 462 aa20.5■□□□□ 0.87
SPSB3-208ENST00000566339 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.5■□□□□ 0.87
SPSB3-208ENST00000566339 AP3D1O14617 1153 aa20.5■□□□□ 0.87
SPSB3-208ENST00000566339 OR10H3O60404 316 aa20.5■□□□□ 0.87
SPSB3-208ENST00000566339 CKMT1AP12532 417 aa20.5■□□□□ 0.87
SPSB3-208ENST00000566339 RECQLP46063 649 aaPredicted RBP20.5■□□□□ 0.87
SPSB3-208ENST00000566339 ATN1P54259 1190 aaPredicted RBP20.5■□□□□ 0.87
SPSB3-208ENST00000566339 WNT4P56705 351 aa20.5■□□□□ 0.87
SPSB3-208ENST00000566339 RAB25P57735 213 aa20.5■□□□□ 0.87
SPSB3-208ENST00000566339 RIPPLY1Q0D2K3 151 aa20.5■□□□□ 0.87
SPSB3-208ENST00000566339 RAB40BQ12829 278 aa20.5■□□□□ 0.87
SPSB3-208ENST00000566339 DOC2BQ14184 412 aa20.5■□□□□ 0.87
SPSB3-208ENST00000566339 MZT2BQ6NZ67 158 aa20.5■□□□□ 0.87
SPSB3-208ENST00000566339 CEACAM20Q6UY09 585 aa20.5■□□□□ 0.87
SPSB3-208ENST00000566339 USP30Q70CQ3 517 aa20.5■□□□□ 0.87
SPSB3-208ENST00000566339 DPPA4Q7L190 304 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms