RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 DNAJC11Q9NVH1 559 aa9.85□□□□□ -0.83
SHF-203ENST00000558294 ALKBH4Q9NXW9 302 aa9.85□□□□□ -0.83
SHF-203ENST00000558294 CRIM1Q9NZV1 1036 aa9.85□□□□□ -0.83
SHF-203ENST00000558294 B4GALT7Q9UBV7 327 aa9.85□□□□□ -0.83
SHF-203ENST00000558294 COPS7AQ9UBW8 275 aa9.85□□□□□ -0.83
SHF-203ENST00000558294 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.85□□□□□ -0.83
SHF-203ENST00000558294 NCKAP5O14513 1909 aa9.85□□□□□ -0.83
SHF-203ENST00000558294 PRRC2AP48634 2157 aaKnown RBP9.85□□□□□ -0.83
SHF-203ENST00000558294 ARHGAP21Q5T5U3 1957 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 ESPNB1AK53 854 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 SYT5O00445 386 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 CLGNO14967 610 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 PHGDHO43175 533 aaKnown RBP9.84□□□□□ -0.83
SHF-203ENST00000558294 IGKV3-11P04433 115 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 RFPL3SP0C7P2 107 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 STMN1P16949 149 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 EPORP19235 508 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 CD22P20273 847 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 PEX19P40855 299 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 ID2Q02363 134 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 ILF2Q12905 390 aaKnown RBP9.84□□□□□ -0.83
SHF-203ENST00000558294 FOXD4Q12950 439 aaPredicted RBP9.84□□□□□ -0.83
SHF-203ENST00000558294 DOC2AQ14183 400 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 FBXO48Q5FWF7 155 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 SLC22A10Q63ZE4 541 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 RELL1Q8IUW5 271 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 C9orf40Q8IXQ3 194 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 TCAIMQ8N3R3 496 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 ACOT4Q8N9L9 421 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 RELL2Q8NC24 303 aaPredicted RBP9.84□□□□□ -0.83
SHF-203ENST00000558294 NUBPLQ8TB37 319 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 PAQR8Q8TEZ7 354 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 SPACA9Q96E40 222 aaPredicted RBP9.84□□□□□ -0.83
SHF-203ENST00000558294 PTCD3Q96EY7 689 aaKnown RBP9.84□□□□□ -0.83
SHF-203ENST00000558294 TSPAN17Q96FV3 270 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 RMND5BQ96G75 393 aaPredicted RBP9.84□□□□□ -0.83
SHF-203ENST00000558294 GPR22Q99680 433 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 SH3GL2Q99962 352 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 MS4A8Q9BY19 250 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 DERL2Q9GZP9 239 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 CDC42EP4Q9H3Q1 356 aaKnown RBP9.84□□□□□ -0.83
SHF-203ENST00000558294 GSX1Q9H4S2 264 aaPredicted RBP9.84□□□□□ -0.83
SHF-203ENST00000558294 EXO5Q9H790 373 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 POPDC3Q9HBV1 291 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 PROK2Q9HC23 129 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 PLEKHA6Q9Y2H5 1048 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 PCDHGB3Q9Y5G1 929 aa9.84□□□□□ -0.83
SHF-203ENST00000558294 LRRC3CA6NJW4 275 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 A6NNC1 897 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 HSPB2A8KAH6 182 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 POC1B-GALNT4F8VUJ3 575 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 HRKO00198 91 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 RTCAO00442 366 aaKnown RBP9.83□□□□□ -0.84
SHF-203ENST00000558294 FGF17O60258 216 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 SCELO95171 688 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 FAM153BP0C7A2 387 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 CCDC166P0CW27 439 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 DNASE1P24855 282 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 ATP5A1P25705 553 aaKnown RBP9.83□□□□□ -0.84
SHF-203ENST00000558294 UQCRC1P31930 480 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 STT3AP46977 705 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 HSPA7P48741 367 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 IGLV3-21P80748 117 aaPredicted RBP9.83□□□□□ -0.84
SHF-203ENST00000558294 NAB1Q13506 487 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 SLMAPQ14BN4 828 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 HSPB2Q16082 182 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 PDK4Q16654 411 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 FAM153CQ494X1 144 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 CDKL4Q5MAI5 379 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 MROH9Q5TGP6 573 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 PRAMEF20Q5VT98 475 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 RAPH1Q70E73 1250 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 CDC20BQ86Y33 519 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 ULK2Q8IYT8 1036 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 MMP21Q8N119 569 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 LRRC25Q8N386 305 aaPredicted RBP9.83□□□□□ -0.84
SHF-203ENST00000558294 FBXW8Q8N3Y1 598 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 SNX31Q8N9S9 440 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 NAXEQ8NCW5 288 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 SRFBP1Q8NEF9 429 aaKnown RBP9.83□□□□□ -0.84
SHF-203ENST00000558294 C7orf57Q8NEG2 295 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 NEIL3Q8TAT5 605 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 SLC22A8Q8TCC7 542 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 ESAMQ96AP7 390 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 SENP5Q96HI0 755 aaPredicted RBP9.83□□□□□ -0.84
SHF-203ENST00000558294 ALPK1Q96QP1 1244 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 TBCDQ9BTW9 1192 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 EFCAB11Q9BUY7 163 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 ROGDIQ9GZN7 287 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 SLC6A15Q9H2J7 730 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 CNOT10Q9H9A5 744 aaKnown RBP9.83□□□□□ -0.84
SHF-203ENST00000558294 ZFP64Q9NPA5 681 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 ACKR4Q9NPB9 350 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 DMRT3Q9NQL9 472 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 QPCTLQ9NXS2 382 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 WWOXQ9NZC7 414 aa9.83□□□□□ -0.84
SHF-203ENST00000558294 BOKQ9UMX3 212 aaPredicted RBP9.83□□□□□ -0.84
SHF-203ENST00000558294 RPH3AQ9Y2J0 694 aaPredicted RBP9.83□□□□□ -0.84
SHF-203ENST00000558294 CHCHD2Q9Y6H1 151 aaPredicted RBP9.83□□□□□ -0.84
SHF-203ENST00000558294 SPACA6W5XKT8 324 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms