RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 MDC1Q14676 2089 aaKnown RBP10□□□□□ -0.81
TPM1-210ENST00000558264 TRBV4-1A0A0J9YWV2 114 aa10□□□□□ -0.81
TPM1-210ENST00000558264 PRICKLE3O43900 615 aaPredicted RBP10□□□□□ -0.81
TPM1-210ENST00000558264 AIFM1O95831 613 aa10□□□□□ -0.81
TPM1-210ENST00000558264 CHRM5P08912 532 aaPredicted RBP10□□□□□ -0.81
TPM1-210ENST00000558264 TFPTP0C1Z6 253 aa10□□□□□ -0.81
TPM1-210ENST00000558264 HIST1H1TP22492 207 aaPredicted RBP10□□□□□ -0.81
TPM1-210ENST00000558264 PSMB9P28065 219 aa10□□□□□ -0.81
TPM1-210ENST00000558264 XCR1P46094 333 aa10□□□□□ -0.81
TPM1-210ENST00000558264 TPMTP51580 245 aa10□□□□□ -0.81
TPM1-210ENST00000558264 GABARAPL2P60520 117 aa10□□□□□ -0.81
TPM1-210ENST00000558264 IL18R1Q13478 541 aa10□□□□□ -0.81
TPM1-210ENST00000558264 LASP1Q14847 261 aaKnown RBP10□□□□□ -0.81
TPM1-210ENST00000558264 LTB4RQ15722 352 aa10□□□□□ -0.81
TPM1-210ENST00000558264 MICAQ29983 383 aa10□□□□□ -0.81
TPM1-210ENST00000558264 ABHD17CQ6PCB6 329 aa10□□□□□ -0.81
TPM1-210ENST00000558264 CCDC80Q76M96 950 aa10□□□□□ -0.81
TPM1-210ENST00000558264 TAGAPQ8N103 731 aa10□□□□□ -0.81
TPM1-210ENST00000558264 AQP11Q8NBQ7 271 aa10□□□□□ -0.81
TPM1-210ENST00000558264 PHF10Q8WUB8 498 aaKnown RBP10□□□□□ -0.81
TPM1-210ENST00000558264 FBLIM1Q8WUP2 373 aa10□□□□□ -0.81
TPM1-210ENST00000558264 FAR1Q8WVX9 515 aa10□□□□□ -0.81
TPM1-210ENST00000558264 PROX1Q92786 737 aa10□□□□□ -0.81
TPM1-210ENST00000558264 NRBF2Q96F24 287 aa10□□□□□ -0.81
TPM1-210ENST00000558264 CNRIP1Q96F85 164 aaPredicted RBP10□□□□□ -0.81
TPM1-210ENST00000558264 C16orf58Q96GQ5 468 aa10□□□□□ -0.81
TPM1-210ENST00000558264 PIP5K1AQ99755 562 aa10□□□□□ -0.81
TPM1-210ENST00000558264 TCEAL2Q9H3H9 227 aaPredicted RBP10□□□□□ -0.81
TPM1-210ENST00000558264 ARMC7Q9H6L4 198 aa10□□□□□ -0.81
TPM1-210ENST00000558264 MVB12BQ9H7P6 319 aa10□□□□□ -0.81
TPM1-210ENST00000558264 NEUROD4Q9HD90 331 aa10□□□□□ -0.81
TPM1-210ENST00000558264 SLC35C2Q9NQQ7 365 aa10□□□□□ -0.81
TPM1-210ENST00000558264 PRDM7Q9NQW5 492 aa10□□□□□ -0.81
TPM1-210ENST00000558264 CD207Q9UJ71 328 aa10□□□□□ -0.81
TPM1-210ENST00000558264 NCKAP1Q9Y2A7 1128 aa10□□□□□ -0.81
TPM1-210ENST00000558264 M0R3H8 397 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 DNAJB6O75190 326 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 SOX14O95416 240 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 IFNW1P05000 195 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 IGFBP1P08833 259 aaPredicted RBP9.99□□□□□ -0.81
TPM1-210ENST00000558264 CCDC159P0C7I6 412 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 JUNBP17275 347 aaPredicted RBP9.99□□□□□ -0.81
TPM1-210ENST00000558264 CCNA2P20248 432 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 MAGP20916 626 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 ATP5A1P25705 553 aaKnown RBP9.99□□□□□ -0.81
TPM1-210ENST00000558264 TEAD1P28347 426 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 SH3BGRP55822 239 aaPredicted RBP9.99□□□□□ -0.81
TPM1-210ENST00000558264 SLC35A2P78381 396 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 BTN3A2P78410 334 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 GRSF1Q12849 480 aaKnown RBP eCLIP9.99□□□□□ -0.81
TPM1-210ENST00000558264 NFATC3Q12968 1075 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 TOP3AQ13472 1001 aaPredicted RBP9.99□□□□□ -0.81
TPM1-210ENST00000558264 AQP6Q13520 282 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 SPCS2Q15005 226 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 PRRT3Q5FWE3 981 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 MTSS1LQ765P7 747 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 ARMC8Q8IUR7 673 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 CCDC103Q8IW40 242 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 TMEFF1Q8IYR6 380 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 TANKQ92844 425 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 MUL1Q969V5 352 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 SLC35G5Q96KT7 338 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 DOK1Q99704 481 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 C6orf106Q9H6K1 298 aaPredicted RBP9.99□□□□□ -0.81
TPM1-210ENST00000558264 NT5DC2Q9H857 520 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 RMI1Q9H9A7 625 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 PREBQ9HCU5 417 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 NDRG2Q9UN36 371 aaKnown RBP9.99□□□□□ -0.81
TPM1-210ENST00000558264 KCNE3Q9Y6H6 103 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 SCN2AQ99250 2005 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 A0A0J9YVX5 310 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 GSAPA4D1B5 854 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 ZNF860A6NHJ4 632 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 MAN2B1O00754 1011 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 MFN2O95140 757 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 GASTP01350 101 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 IFNA14P01570 189 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 LCKP06239 509 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 CELA2BP08218 269 aaPredicted RBP9.99□□□□□ -0.81
TPM1-210ENST00000558264 NR2F1P10589 423 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 POLR2CP19387 275 aaPredicted RBP9.99□□□□□ -0.81
TPM1-210ENST00000558264 CMPK1P30085 196 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 TTKP33981 857 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 OLR1P78380 273 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 NFATC4Q14934 902 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 ZIC1Q15915 447 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 TSPYL5Q86VY4 417 aaPredicted RBP9.99□□□□□ -0.81
TPM1-210ENST00000558264 MEX3DQ86XN8 651 aaKnown RBP9.99□□□□□ -0.81
TPM1-210ENST00000558264 ZNF420Q8TAQ5 688 aaPredicted RBP9.99□□□□□ -0.81
TPM1-210ENST00000558264 KAT2AQ92830 837 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 ALPK1Q96QP1 1244 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 ZNF347Q96SE7 839 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 MAPKAP1Q9BPZ7 522 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 TREX2Q9BQ50 279 aaPredicted RBP9.99□□□□□ -0.81
TPM1-210ENST00000558264 TUBA1CQ9BQE3 449 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 SRMSQ9H3Y6 488 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 TMEM74BQ9NUR3 256 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 SCN3BQ9NY72 215 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 ASB4Q9Y574 426 aa9.99□□□□□ -0.81
TPM1-210ENST00000558264 PCDHGA4Q9Y5G9 962 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms