RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 GUCY2DQ02846 1103 aa17.33■□□□□ 0.36
CPSF2-203ENST00000554290 TRADDQ15628 312 aa17.33■□□□□ 0.36
CPSF2-203ENST00000554290 ZNF791Q3KP31 576 aaPredicted RBP17.33■□□□□ 0.36
CPSF2-203ENST00000554290 C18orf63Q68DL7 685 aa17.33■□□□□ 0.36
CPSF2-203ENST00000554290 ZNF585AQ6P3V2 769 aa17.33■□□□□ 0.36
CPSF2-203ENST00000554290 KLC3Q6P597 504 aa17.33■□□□□ 0.36
CPSF2-203ENST00000554290 TRILQ7L0X0 811 aa17.33■□□□□ 0.36
CPSF2-203ENST00000554290 SLC29A4Q7RTT9 530 aa17.33■□□□□ 0.36
CPSF2-203ENST00000554290 CCDC71Q8IV32 467 aaPredicted RBP17.33■□□□□ 0.36
CPSF2-203ENST00000554290 C9orf40Q8IXQ3 194 aa17.33■□□□□ 0.36
CPSF2-203ENST00000554290 DND1Q8IYX4 353 aaKnown RBP17.33■□□□□ 0.36
CPSF2-203ENST00000554290 ST13P4Q8IZP2 240 aaPredicted RBP17.33■□□□□ 0.36
CPSF2-203ENST00000554290 RNF175Q8N4F7 328 aa17.33■□□□□ 0.36
CPSF2-203ENST00000554290 RPRMLQ8N4K4 120 aa17.33■□□□□ 0.36
CPSF2-203ENST00000554290 OR5M9Q8NGP3 310 aa17.33■□□□□ 0.36
CPSF2-203ENST00000554290 LDAHQ9H6V9 325 aa17.33■□□□□ 0.36
CPSF2-203ENST00000554290 WDR41Q9HAD4 459 aa17.33■□□□□ 0.36
CPSF2-203ENST00000554290 LYARQ9NX58 379 aaKnown RBP17.33■□□□□ 0.36
CPSF2-203ENST00000554290 TUBA8Q9NY65 449 aaPredicted RBP17.33■□□□□ 0.36
CPSF2-203ENST00000554290 ACAD8Q9UKU7 415 aa17.33■□□□□ 0.36
CPSF2-203ENST00000554290 TNPO3Q9Y5L0 923 aaKnown RBP17.33■□□□□ 0.36
CPSF2-203ENST00000554290 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.33■□□□□ 0.36
CPSF2-203ENST00000554290 CACNA1CQ13936 2221 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 ATP6AP2A0A1C7CYW4 349 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 NKX2-6A6NCS4 301 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 FAM90A27PA6NNH2 459 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 AQP7O14520 342 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 PROM1O43490 865 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 OR10H2O60403 315 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 ATP6AP2O75787 350 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 TOXO94900 526 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 GPR75O95800 540 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 IGFBP2P18065 325 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 HNRNPH2P55795 449 aaKnown RBP17.32■□□□□ 0.36
CPSF2-203ENST00000554290 KRTAP10-9P60411 292 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 RPS13P62277 151 aaKnown RBP17.32■□□□□ 0.36
CPSF2-203ENST00000554290 ETF1P62495 437 aaKnown RBP17.32■□□□□ 0.36
CPSF2-203ENST00000554290 IRF9Q00978 393 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 FOXO1Q12778 655 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 CUL3Q13618 768 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 ZNF267Q14586 743 aaPredicted RBP17.32■□□□□ 0.36
CPSF2-203ENST00000554290 PCBP2Q15366 365 aaKnown RBP eCLIP17.32■□□□□ 0.36
CPSF2-203ENST00000554290 METTL2BQ6P1Q9 378 aaKnown RBP17.32■□□□□ 0.36
CPSF2-203ENST00000554290 CYP20A1Q6UW02 462 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 B3GNT6Q6ZMB0 384 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 OR10Q1Q8NGQ4 319 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 PAQR8Q8TEZ7 354 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 SARAFQ96BY9 339 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 MRRFQ96E11 262 aaKnown RBP17.32■□□□□ 0.36
CPSF2-203ENST00000554290 SPACA9Q96E40 222 aaPredicted RBP17.32■□□□□ 0.36
CPSF2-203ENST00000554290 CNPPD1Q9BV87 410 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 UCK2Q9BZX2 261 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 EXO5Q9H790 373 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 IPPKQ9H8X2 491 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 SNX15Q9NRS6 342 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 PSD3Q9NYI0 1048 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 CNIH4Q9P003 139 aa17.32■□□□□ 0.36
CPSF2-203ENST00000554290 A0A096LPK6 155 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 KLK8O60259 260 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 HCN1O60741 890 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 KLHL2O95198 593 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 FAM58BPP0C7Q3 252 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 SERPINB3P29508 390 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 TYK2P29597 1187 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 PHBP35232 272 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 PIGAP37287 484 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 KCNJ2P63252 427 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 GTF2H2Q13888 395 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 UAP1Q16222 522 aaPredicted RBP17.31■□□□□ 0.36
CPSF2-203ENST00000554290 CPSF6Q16630 551 aaKnown RBP eCLIP17.31■□□□□ 0.36
CPSF2-203ENST00000554290 SPRED3Q2MJR0 410 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 WLSQ5T9L3 541 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 GTF2H2CQ6P1K8 395 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 RNF111Q6ZNA4 994 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 DGAT2L6Q6ZPD8 337 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 CDH24Q86UP0 819 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 RIT1Q92963 219 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 TTYH2Q9BSA4 534 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 DDX31Q9H8H2 851 aaKnown RBP17.31■□□□□ 0.36
CPSF2-203ENST00000554290 SLC24A3Q9HC58 644 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 NPDC1Q9NQX5 325 aaPredicted RBP17.31■□□□□ 0.36
CPSF2-203ENST00000554290 CPSF2Q9P2I0 782 aaKnown RBP17.31■□□□□ 0.36
CPSF2-203ENST00000554290 BOKQ9UMX3 212 aaPredicted RBP17.31■□□□□ 0.36
CPSF2-203ENST00000554290 ASB4Q9Y574 426 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 LIPGQ9Y5X9 500 aa17.31■□□□□ 0.36
CPSF2-203ENST00000554290 OR6C76A6NM76 312 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 HRKO00198 91 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 FOXE1O00358 373 aaPredicted RBP17.3■□□□□ 0.36
CPSF2-203ENST00000554290 WDR1O75083 606 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 EEDO75530 441 aaKnown RBP17.3■□□□□ 0.36
CPSF2-203ENST00000554290 PRKRAO75569 313 aaKnown RBP17.3■□□□□ 0.36
CPSF2-203ENST00000554290 NADKO95544 446 aaPredicted RBP17.3■□□□□ 0.36
CPSF2-203ENST00000554290 HOXD4P09016 255 aaPredicted RBP17.3■□□□□ 0.36
CPSF2-203ENST00000554290 NR2F6P10588 404 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 MSX1P28360 303 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 SERPINB8P50452 374 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 HERVK_113P63132 956 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 ERVK-8P63133 956 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 TFF3Q07654 80 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 MRM1Q6IN84 353 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms