RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 CCM2Q9BSQ5 444 aa4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 URM1Q9BTM9 101 aaKnown RBP4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 NDUFAF3Q9BU61 184 aa4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 RBM24Q9BX46 236 aaKnown RBP4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 PKIBQ9C010 78 aa4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 SLC26A1Q9H2B4 701 aa4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 TXLNGQ9NUQ3 528 aa4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 EXOC1Q9NV70 894 aa4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 ZNF224Q9NZL3 707 aa4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 OR6C2Q9NZP2 312 aa4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 RNF14Q9UBS8 474 aa4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 EPHA6Q9UF33 1036 aa4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 CRLS1Q9UJA2 301 aa4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 PSME2Q9UL46 239 aa4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 CHTOPQ9Y3Y2 248 aaKnown RBP4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 PARD3Q8TEW0 1356 aa4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 PTPRUQ92729 1446 aa4.12□□□□□ -1.75
RAB3IP-214ENST00000550847 CCDC180Q9P1Z9 1646 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 TRBV5-5A0A0J9YX44 114 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 GOLGA6L7A0A1B0GV03 622 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 ZNF732B4DXR9 585 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 PPIAL4DF5H284 164 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 BUB3O43684 328 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 KIF5CO60282 957 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 ECE2O60344 883 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 GOT2P00505 430 aaKnown RBP4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 CSF2P04141 144 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 FGF4P08620 206 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 DAOP14920 347 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 ITGA2P17301 1181 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 CEBPDP49716 269 aaPredicted RBP4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 SUCLG1P53597 346 aaKnown RBP4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 SLC20A2Q08357 652 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 MFGE8Q08431 387 aaPredicted RBP4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 OR1C1Q15619 314 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 CALCRLQ16602 461 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 PHYHD1Q5SRE7 291 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 C1orf185Q5T7R7 199 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 PRAMEF20Q5VT98 475 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 TTC23Q5W5X9 447 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 CDC42EP5Q6NZY7 148 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 SLC27A4Q6P1M0 643 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 C16orf87Q6PH81 154 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 DHRS11Q6UWP2 260 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 OTUD6AQ7L8S5 288 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 NANOGNBQ7Z5D8 188 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 VPS36Q86VN1 386 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 ODF3L1Q8IXM7 274 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 ZC3H3Q8IXZ2 948 aaKnown RBP4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 MUC20Q8N307 709 aaPredicted RBP4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 DCLK2Q8N568 766 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 RFLNBQ8N5W9 214 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 CCDC148Q8NFR7 591 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 OR52J3Q8NH60 311 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 OLIG1Q8TAK6 271 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 HSD17B8Q92506 261 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 RASD2Q96D21 266 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 SENP5Q96HI0 755 aaPredicted RBP4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 IL17FQ96PD4 163 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 DUX5Q96PT3 197 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 USP28Q96RU2 1077 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 TESK2Q96S53 571 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 LAT2Q9GZY6 243 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 FAM124BQ9H5Z6 455 aaPredicted RBP4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 VIPAS39Q9H9C1 493 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 SLC52A3Q9NQ40 469 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 TCF7L2Q9NQB0 619 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 SDR39U1Q9NRG7 319 aaPredicted RBP4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 FAM114A2Q9NRY5 505 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 AGPAT5Q9NUQ2 364 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 TBC1D13Q9NVG8 400 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 RNF186Q9NXI6 227 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 PLEK2Q9NYT0 353 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 SMARCAL1Q9NZC9 954 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 ERVK-18Q9QC07 812 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 MRTO4Q9UKD2 239 aaKnown RBP4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 SLC7A7Q9UM01 511 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 OR10H1Q9Y4A9 318 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 RNF115Q9Y4L5 304 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 AP4B1Q9Y6B7 739 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 SLCO1B1Q9Y6L6 691 aa4.11□□□□□ -1.75
RAB3IP-214ENST00000550847 ARPC4-TTLL3A0A0A6YYG9 625 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 FAM240BA0A1B0GVZ2 78 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 HELTA6NFD8 242 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 WASH3PC4AMC7 463 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 PRAC2D3DTV9 90 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 CASC3O15234 703 aaKnown RBP4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 ZNF264O43296 627 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 ZNF208O43345 1280 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 BUB1O43683 1085 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 XPNPEP2O43895 674 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 BCAS1O75363 584 aaPredicted RBP4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 BBOX1O75936 387 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 EML2O95834 649 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 IGHEP01854 428 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 UMODP07911 640 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 IGHV4-31P0DP07 118 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 CCDC130P13994 396 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 ZNF44P15621 663 aa4.1□□□□□ -1.75
RAB3IP-214ENST00000550847 HNF1AP20823 631 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms