RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PRKNO60260 465 aaPredicted RBP12.05□□□□□ -0.48
SCAF11-209ENST00000547018 LDB3O75112 727 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 CDK4P11802 303 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 PPIBP23284 216 aaKnown RBP12.05□□□□□ -0.48
SCAF11-209ENST00000547018 AVPR1BP47901 424 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 TUBA4AP68366 448 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 ALDH6A1Q02252 535 aaKnown RBP12.05□□□□□ -0.48
SCAF11-209ENST00000547018 REEP3Q6NUK4 255 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 PARGQ86W56 976 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 ARMC8Q8IUR7 673 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 OXR1Q8N573 874 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 OR13H1Q8NG92 308 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 ZBED6CLQ96FA7 236 aaPredicted RBP12.05□□□□□ -0.48
SCAF11-209ENST00000547018 HHIPQ96QV1 700 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 ZNF300Q96RE9 604 aaPredicted RBP12.05□□□□□ -0.48
SCAF11-209ENST00000547018 SH3GL3Q99963 347 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 ZNF576Q9H609 170 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 MAGIXQ9H6Y5 334 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 RHBDL2Q9NX52 303 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 GPR83Q9NYM4 423 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 ZNF624Q9P2J8 865 aaPredicted RBP12.05□□□□□ -0.48
SCAF11-209ENST00000547018 MKLN1Q9UL63 735 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 ENTPD4Q9Y227 616 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 COL4A3Q01955 1670 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 KNTC1P50748 2209 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 CLDN24A6NM45 220 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 ABCB7O75027 752 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 ZNF888P0CJ79 500 aaPredicted RBP12.05□□□□□ -0.48
SCAF11-209ENST00000547018 NTSP30990 170 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 EMX1Q04741 257 aaPredicted RBP12.05□□□□□ -0.48
SCAF11-209ENST00000547018 ZNF691Q5VV52 312 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 PRSS41Q7RTY9 318 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 TSEN54Q7Z6J9 526 aaKnown RBP12.05□□□□□ -0.48
SCAF11-209ENST00000547018 LACC1Q8IV20 430 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 SLC35G5Q96KT7 338 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 BMFQ96LC9 184 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 ALPK1Q96QP1 1244 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 FUNDC2Q9BWH2 189 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 ADAP2Q9NPF8 381 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 SPATA7Q9P0W8 599 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 RP1P56715 2156 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 LOC105369274A0A096LPK9 316 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 LOC102723532A0A0G2JNH3 316 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 LRRC72A6NJI9 287 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 CTSEP14091 401 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 DDX5P17844 614 aaKnown RBP12.05□□□□□ -0.48
SCAF11-209ENST00000547018 CCNA2P20248 432 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 PEBP1P30086 187 aaKnown RBP12.05□□□□□ -0.48
SCAF11-209ENST00000547018 PCGF2P35227 344 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 KRT20P35900 424 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 VEZF1Q14119 521 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 CCNJQ5T5M9 372 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 C1QTNF12Q5T7M4 302 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 CCDC71Q8IV32 467 aaPredicted RBP12.05□□□□□ -0.48
SCAF11-209ENST00000547018 OR4N4Q8N0Y3 316 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 OR5T3Q8NGG3 340 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 CLIP3Q96DZ5 547 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 IL21RQ9HBE5 538 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 SLC35C2Q9NQQ7 365 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 APOBEC3BQ9UH17 382 aaKnown RBP12.05□□□□□ -0.48
SCAF11-209ENST00000547018 CA14Q9ULX7 337 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 CORO2BQ9UQ03 480 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 NTNG1Q9Y2I2 539 aa12.05□□□□□ -0.48
SCAF11-209ENST00000547018 NPIPA5A0A0B4J1W7 369 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 C2CD4DB7Z1M9 353 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 NPIPA7E9PJI5 369 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 SDC3O75056 442 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 AIFM1O95831 613 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 BCL10O95999 233 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 NPIPA8P0DM63 369 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 UQCRC2P22695 453 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 CMPK1P30085 196 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 HYAL2Q12891 473 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 ADAM15Q13444 863 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 SOWAHCQ53LP3 525 aaPredicted RBP12.04□□□□□ -0.48
SCAF11-209ENST00000547018 FBXO15Q8NCQ5 510 aaPredicted RBP12.04□□□□□ -0.48
SCAF11-209ENST00000547018 FCRL1Q96LA6 429 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 SMAD5Q99717 465 aaKnown RBP12.04□□□□□ -0.48
SCAF11-209ENST00000547018 TREX2Q9BQ50 279 aaPredicted RBP12.04□□□□□ -0.48
SCAF11-209ENST00000547018 EPS8L2Q9H6S3 715 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 TMEM74BQ9NUR3 256 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 SLC13A4Q9UKG4 626 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 ZNF106Q9H2Y7 1883 aaKnown RBP12.04□□□□□ -0.48
SCAF11-209ENST00000547018 DMDP11532 3685 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 LTBRP36941 435 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 TARDBPQ13148 414 aaKnown RBP eCLIP12.04□□□□□ -0.48
SCAF11-209ENST00000547018 DYNC1I2Q13409 638 aaKnown RBP12.04□□□□□ -0.48
SCAF11-209ENST00000547018 GPR18Q14330 331 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 RAB30Q15771 203 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 CLEC12AQ5QGZ9 265 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 DNASE1L2Q92874 299 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 CNRIP1Q96F85 164 aaPredicted RBP12.04□□□□□ -0.48
SCAF11-209ENST00000547018 WDR92Q96MX6 357 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 HRASLS2Q9NWW9 162 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 TMCC3Q9ULS5 477 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 COLEC10Q9Y6Z7 277 aa12.04□□□□□ -0.48
SCAF11-209ENST00000547018 GPR179Q6PRD1 2367 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 PLRG1O43660 514 aaKnown RBP12.03□□□□□ -0.48
SCAF11-209ENST00000547018 CH25HO95992 272 aa12.03□□□□□ -0.48
SCAF11-209ENST00000547018 GASTP01350 101 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms