RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 NPIPA5A0A0B4J1W7 369 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 NPIPA7E9PJI5 369 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 TMX2-CTNND1H3BSU7 103 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 HMGN4O00479 90 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 MAN2B1O00754 1011 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 SLC28A2O43868 658 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 XPNPEP2O43895 674 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 PRMT3O60678 531 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 CLEC3AO75596 197 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 NPIPA8P0DM63 369 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 UMPSP11172 480 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 CCR3P51677 355 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 SHC2P98077 582 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 NADK2Q4G0N4 442 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 TRMT12Q53H54 448 aaKnown RBP11.29□□□□□ -0.6
CCDC38-202ENST00000546386 CPZQ66K79 652 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 FAM111BQ6SJ93 734 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 SPRED1Q7Z699 444 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 ASPGQ86U10 573 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 PAQR7Q86WK9 346 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 PAPD5Q8NDF8 572 aaKnown RBP11.29□□□□□ -0.6
CCDC38-202ENST00000546386 GPBAR1Q8TDU6 330 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 UTP15Q8TED0 518 aaKnown RBP11.29□□□□□ -0.6
CCDC38-202ENST00000546386 SLC9A6Q92581 669 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 COL21A1Q96P44 957 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 IL1RAPQ9NPH3 570 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 TMEM9Q9P0T7 183 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 DNAJB9Q9UBS3 223 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 PCDHGA8Q9Y5G5 932 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 AP1M2Q9Y6Q5 423 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 A0A0A6YYC8 382 aaPredicted RBP11.29□□□□□ -0.6
CCDC38-202ENST00000546386 H3BSA7 217 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 I3L1I5 382 aaPredicted RBP11.29□□□□□ -0.6
CCDC38-202ENST00000546386 M0R3H8 397 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 PCDH17O14917 1159 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 FCMRO60667 390 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 RDH16O75452 317 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 ZBTB11O95625 1053 aaPredicted RBP11.29□□□□□ -0.6
CCDC38-202ENST00000546386 RETP07949 1114 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 IGFBP1P08833 259 aaPredicted RBP11.29□□□□□ -0.6
CCDC38-202ENST00000546386 ST13P50502 369 aaKnown RBP11.29□□□□□ -0.6
CCDC38-202ENST00000546386 DAPP51397 102 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 DSTNP60981 165 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 NEDD8Q15843 81 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 LEXMQ3ZCV2 418 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCDC38-202ENST00000546386 TMEM236Q5W0B7 351 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 OR2T5Q6IEZ7 315 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 DEF8Q6ZN54 512 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 TRIML2Q8N7C3 387 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 OR2T29Q8NH02 315 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 SDCCAG3Q96C92 435 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 CCDC3Q9BQI4 270 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 YIPF2Q9BWQ6 316 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 FBRSQ9HAH7 460 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 TM9SF3Q9HD45 589 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 MKLN1Q9UL63 735 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 NTNG1Q9Y2I2 539 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 KNTC1P50748 2209 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 THADAQ6YHU6 1953 aa11.29□□□□□ -0.6
CCDC38-202ENST00000546386 A0A1B0GVT2 93 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 TLR4O00206 839 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 SEMA7AO75326 666 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 CAPNS1P04632 268 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 SLC35G6P0C7Q6 338 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 PCBP4P57723 403 aaKnown RBP11.28□□□□□ -0.6
CCDC38-202ENST00000546386 DAG1Q14118 895 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 EXOSC7Q15024 291 aaKnown RBP11.28□□□□□ -0.6
CCDC38-202ENST00000546386 SLC36A3Q495N2 470 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 GPR155Q7Z3F1 870 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 ST13P4Q8IZP2 240 aaPredicted RBP11.28□□□□□ -0.6
CCDC38-202ENST00000546386 TNIP2Q8NFZ5 429 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 OR52N2Q8NGI0 321 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 OR4D11Q8NGI4 311 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 MBOAT4Q96T53 435 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 GSDMCQ9BYG8 508 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 ING2Q9H160 280 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 SLC2A4RGQ9NR83 387 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 THUMPD1Q9NXG2 353 aaKnown RBP11.28□□□□□ -0.6
CCDC38-202ENST00000546386 NDUFAF4Q9P032 175 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 SNX7Q9UNH6 387 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 SAMD4AQ9UPU9 718 aaKnown RBP11.28□□□□□ -0.6
CCDC38-202ENST00000546386 C2orf72A6NCS6 295 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 C5orf58C9J3I9 102 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 HRKO00198 91 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 PROM1O43490 865 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 COL4A2P08572 1712 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 THRBP10828 461 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 FCGR1AP12314 374 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 CPN2P22792 545 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 POU1F1P28069 291 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 FMO3P31513 532 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 XKP51811 444 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 FOXK1P85037 733 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 SPIBQ01892 262 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 PUM1Q14671 1186 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCDC38-202ENST00000546386 GPAT3Q53EU6 434 aa11.28□□□□□ -0.6
CCDC38-202ENST00000546386 INTS11Q5TA45 600 aaKnown RBP11.28□□□□□ -0.6
CCDC38-202ENST00000546386 RBM44Q6ZP01 1051 aaKnown RBP11.28□□□□□ -0.6
CCDC38-202ENST00000546386 TMEM26Q6ZUK4 368 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms