RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 DUX1O43812 170 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 CLEC3AO75596 197 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 GJB3O75712 270 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 SOX30O94993 753 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 IL4RP24394 825 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 GRPRP30550 384 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 GCGRP47871 477 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 RAB28P51157 221 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 GAS6Q14393 721 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 C6orf141Q5SZD1 244 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 CARD17Q5XLA6 110 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 KDELC1Q6UW63 502 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 RNF111Q6ZNA4 994 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 TCEAL4Q96EI5 215 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.24□□□□□ -0.45
CHD4-211ENST00000544484 FTSJ1Q9UET6 329 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 NAV1Q8NEY1 1877 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 A0A1B0GVI7 797 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 OR6C70A6NIJ9 312 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 ADAM12O43184 909 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 CSF2P04141 144 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 GPR4P46093 362 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 CRYZQ08257 329 aaKnown RBP12.23□□□□□ -0.45
CHD4-211ENST00000544484 ADAM15Q13444 863 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 FIGLAQ6QHK4 219 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 PAQR7Q86WK9 346 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 OR8H3Q8N146 312 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 SLC39A11Q8N1S5 342 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 OR2T33Q8NG76 320 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 CCDC120Q96HB5 630 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 TMEM41AQ96HV5 264 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 SECISBP2Q96T21 854 aaKnown RBP12.23□□□□□ -0.45
CHD4-211ENST00000544484 FUZQ9BT04 418 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 G6PC3Q9BUM1 346 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 ZFR2Q9UPR6 939 aaKnown RBP12.23□□□□□ -0.45
CHD4-211ENST00000544484 MYO10Q9HD67 2058 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 PLOD2O00469 737 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 TUBA4AP68366 448 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.23□□□□□ -0.45
CHD4-211ENST00000544484 KDM1BQ8NB78 822 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 C16orf78Q8WTQ4 265 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 L3HYPDHQ96EM0 354 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 TRPV4Q9HBA0 871 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 VNN3Q9NY84 501 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 PTBP2Q9UKA9 531 aaKnown RBP12.23□□□□□ -0.45
CHD4-211ENST00000544484 FAAHO00519 579 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 SORBS2O94875 1100 aaKnown RBP12.23□□□□□ -0.45
CHD4-211ENST00000544484 RASAL1O95294 804 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 FESP07332 822 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 ADORA3P0DMS8 318 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 PORP16435 677 aaPredicted RBP12.23□□□□□ -0.45
CHD4-211ENST00000544484 GADD45AP24522 165 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 FCHO2Q0JRZ9 810 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 FAM86B1Q8N7N1 296 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 SLC12A9Q9BXP2 914 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 RNF38Q9H0F5 515 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 IRF2BPLQ9H1B7 796 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 METTL8Q9H825 291 aaKnown RBP12.23□□□□□ -0.45
CHD4-211ENST00000544484 METTL21EPA6NDL7 271 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 CLRN1P58418 232 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 WDR5P61964 334 aaKnown RBP12.23□□□□□ -0.45
CHD4-211ENST00000544484 SPIN3Q5JUX0 258 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 PDSS1Q5T2R2 415 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 TMEM17Q86X19 198 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 HDAC2Q92769 488 aaKnown RBP12.23□□□□□ -0.45
CHD4-211ENST00000544484 FOXJ1Q92949 421 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 INPP5KQ9BT40 448 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 GPRC5BQ9NZH0 403 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 IL20RAQ9UHF4 553 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 C5P01031 1676 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 SH3D21A4FU49 640 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 GPR89AB7ZAQ6 455 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 GPR89BP0CG08 455 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 CAPN3P20807 821 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 TUBA1BP68363 451 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 TUBA1AQ71U36 451 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 ZNF227Q86WZ6 799 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 SPERTQ8NA61 448 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 PNPLA2Q96AD5 504 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 CCDC115Q96NT0 180 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 SLC30A2Q9BRI3 323 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 LIPT1Q9Y234 373 aa12.23□□□□□ -0.45
CHD4-211ENST00000544484 RLN2P04090 185 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 F8A1P23610 371 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 MAN2A2P49641 1150 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 HSD11B1LQ7Z5J1 315 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 IL22RA1Q8N6P7 574 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 ZNF283Q8N7M2 679 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 FBXO27Q8NI29 283 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 NR4A3Q92570 626 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 TMEM19Q96HH6 336 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 FRMD6Q96NE9 622 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 SLC46A2Q9BY10 475 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 TUBA8Q9NY65 449 aaPredicted RBP12.22□□□□□ -0.45
CHD4-211ENST00000544484 PRDX3P30048 256 aaKnown RBP12.22□□□□□ -0.45
CHD4-211ENST00000544484 RAB39AQ14964 217 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 SGCAQ16586 387 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 UGT8Q16880 541 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 OR52E8Q6IFG1 317 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 ARHGAP12Q8IWW6 846 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms