RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 ENDOUP21128 410 aaKnown RBP13.37□□□□□ -0.27
CLPB-209ENST00000538039 SDC2P34741 201 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 SOX18P35713 384 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 EPHB3P54753 998 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 RPS25P62851 125 aaKnown RBP13.37□□□□□ -0.27
CLPB-209ENST00000538039 GALK2Q01415 458 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 RHAGQ02094 409 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 PCDH1Q08174 1060 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 CNTN1Q12860 1018 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 SYPL1Q16563 259 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 ZFP69Q49AA0 526 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 C12orf73Q69YU5 71 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 GALNT12Q8IXK2 581 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 NLGN4YQ8NFZ3 816 aaPredicted RBP13.37□□□□□ -0.27
CLPB-209ENST00000538039 OR5D16Q8NGK9 328 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 CREB3L4Q8TEY5 395 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 FGF11Q92914 225 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 TCEAL4Q96EI5 215 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 PDXPQ96GD0 296 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 TMEM80Q96HE8 168 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 MRPL9Q9BYD2 267 aaKnown RBP13.37□□□□□ -0.27
CLPB-209ENST00000538039 UCK2Q9BZX2 261 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 OR2B2Q9GZK3 357 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 MALT1Q9UDY8 824 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 GPR52Q9Y2T5 361 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 PCDHGB2Q9Y5G2 931 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 COL4A3Q01955 1670 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 A0A0G2JMP0 313 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 HYKKA2RU49 373 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 A8MVJ9 347 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 LALBAP00709 142 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 ITGA2P17301 1181 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 TIE1P35590 1138 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 CD83Q01151 205 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 RBBP4Q09028 425 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 RAB33AQ14088 237 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 ZNF630Q2M218 657 aaPredicted RBP13.37□□□□□ -0.27
CLPB-209ENST00000538039 TPGS2Q68CL5 300 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 TRIM40Q6P9F5 258 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 ZNF438Q7Z4V0 828 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 TAGAPQ8N103 731 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 ASCC1Q8N9N2 400 aaKnown RBP13.37□□□□□ -0.27
CLPB-209ENST00000538039 OR52I1Q8NGK6 324 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 C9orf43Q8TAL5 461 aaPredicted RBP13.37□□□□□ -0.27
CLPB-209ENST00000538039 CCDC177Q9NQR7 707 aaPredicted RBP13.37□□□□□ -0.27
CLPB-209ENST00000538039 SNX7Q9UNH6 387 aa13.37□□□□□ -0.27
CLPB-209ENST00000538039 NOTCH4Q99466 2003 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 ANKDD1BA6NHY2 528 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 SMLR1H3BR10 107 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 HMGN4O00479 90 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 LILRB5O75023 590 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 PRKRAO75569 313 aaKnown RBP13.36□□□□□ -0.27
CLPB-209ENST00000538039 NCR1O76036 304 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 AP2A2O94973 939 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 STATHP02808 62 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 C1GALT1C1LP0DN25 315 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 PRKCAP17252 672 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 ITGB7P26010 798 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 APEX1P27695 318 aaKnown RBP13.36□□□□□ -0.27
CLPB-209ENST00000538039 DDOSTP39656 456 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 PRLHRP49683 370 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 RORCP51449 518 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 SNRPGP62308 76 aaKnown RBP13.36□□□□□ -0.27
CLPB-209ENST00000538039 HSPB3Q12988 150 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 TARDBPQ13148 414 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLPB-209ENST00000538039 ILKQ13418 452 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 TRIM60Q495X7 471 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 ATAT1Q5SQI0 421 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 ZNF547Q8IVP9 402 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 CPXM2Q8N436 756 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 KLHL6Q8WZ60 621 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 GLYATL1Q969I3 302 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 SLC25A46Q96AG3 418 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 KCNK12Q9HB15 430 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 SIRT3Q9NTG7 399 aaPredicted RBP13.36□□□□□ -0.27
CLPB-209ENST00000538039 NDRG2Q9UN36 371 aaKnown RBP13.36□□□□□ -0.27
CLPB-209ENST00000538039 DOCK9Q9BZ29 2069 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 A0A0G2JN53 185 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 A0A0X1KG70 313 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 ERVH48-1M5A8F1 160 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 PLPP1O14494 284 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 PQBP1O60828 265 aaKnown RBP13.36□□□□□ -0.27
CLPB-209ENST00000538039 KRT75O95678 551 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 CATP04040 527 aaKnown RBP13.36□□□□□ -0.27
CLPB-209ENST00000538039 PIPP12273 146 aaPredicted RBP13.36□□□□□ -0.27
CLPB-209ENST00000538039 VIPR1P32241 457 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 GPC1P35052 558 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 XKP51811 444 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 ZNF33BQ06732 778 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 P2RY14Q15391 338 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 SPOUT1Q5T280 376 aaKnown RBP13.36□□□□□ -0.27
CLPB-209ENST00000538039 MPP7Q5T2T1 576 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 SAXO2Q658L1 398 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 REEP3Q6NUK4 255 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 FAM131AQ6UXB0 335 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 ZER1Q7Z7L7 766 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 RAB43Q86YS6 212 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 KLHDC8AQ8IYD2 350 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 TCEAL8Q8IYN2 117 aa13.36□□□□□ -0.27
CLPB-209ENST00000538039 FLCNQ8NFG4 579 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms