RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 FUZQ9BT04 418 aa11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 SH2B3Q9UQQ2 575 aa11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 SETD1AO15047 1707 aaKnown RBP11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 PFKMP08237 780 aa11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 MAP2K3P46734 347 aa11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 BMXP51813 675 aa11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 UBXN2BQ14CS0 331 aa11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 SF3B4Q15427 424 aaKnown RBP eCLIP11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 NKAPLQ5M9Q1 402 aa11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 CTU1Q7Z7A3 348 aaKnown RBP11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 GDPD1Q8N9F7 314 aa11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 OR5AK3PQ8NH89 298 aa11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 BCL7CQ8WUZ0 217 aaPredicted RBP11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 SLC2A13Q96QE2 648 aa11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 TRMT61BQ9BVS5 477 aaKnown RBP11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 CD244Q9BZW8 370 aa11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 CMAHPQ9Y471 501 aa11.64□□□□□ -0.55
ERGIC1-208ENST00000520399 B4DGG1 531 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 CNTN5O94779 1100 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 TYRP14679 529 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 PLP2Q04941 152 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 C21orf62-AS1Q17RA5 79 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 ZNF776Q68DI1 518 aaPredicted RBP11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 ACBD4Q8NC06 268 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 CAMKVQ8NCB2 501 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 ABHD11Q8NFV4 315 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 BEX2Q9BXY8 128 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 EIF5A2Q9GZV4 153 aaKnown RBP11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 POLR2J3Q9H1A7 115 aaKnown RBP11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 VRTNQ9H8Y1 702 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 CLN5O75503 358 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 TRAPPC6AO75865 159 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 RAB36O95755 333 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 CCNOP22674 350 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 MSX1P28360 303 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 GHRHRQ02643 423 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 ZNF783Q6ZMS7 281 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 TMED4Q7Z7H5 227 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 NAXEQ8NCW5 288 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 LMO3Q8TAP4 145 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 HMGB4Q8WW32 186 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 PEX13Q92968 403 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 YIPF4Q9BSR8 244 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 FZD3Q9NPG1 666 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 TMEM100Q9NV29 134 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 GALPQ9UBC7 116 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 UTS2RQ9UKP6 389 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 A0A0G2JN53 185 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 LCHNA4D1U4 455 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 TLR4O00206 839 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 MMP20O60882 483 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 GKN3PP0CG01 181 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 SNRPD2P62316 118 aaKnown RBP11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 CDK3Q00526 305 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 FAM182AQ5T1J6 154 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 PRSS58Q8IYP2 241 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 OR56B2PQ8NGI1 322 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 C22orf15Q8WYQ4 148 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 KCNJ9Q92806 393 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 ZDHHC7Q9NXF8 308 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 KLRF1Q9NZS2 232 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 MGAT4BQ9UQ53 548 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 ERI3O43414 337 aaKnown RBP11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 JUNDP17535 347 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 ENPP2Q13822 863 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 C2orf27AQ580R0 203 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 EOGTQ5NDL2 527 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 UGT2A3Q6UWM9 527 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 IGDCC3Q8IVU1 814 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 NFKBIDQ8NI38 313 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 NCSTNQ92542 709 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 TMBIM1Q969X1 311 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 PKP2Q99959 881 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 C7orf50Q9BRJ6 194 aaKnown RBP11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 HCN2Q9UL51 889 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 LAMB4A4D0S4 1761 aa11.63□□□□□ -0.55
ERGIC1-208ENST00000520399 HTRA2O43464 458 aaPredicted RBP11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 FGF18O76093 207 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 MT-CO2P00403 227 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 BCHEP06276 602 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 LPLP06858 475 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 GSTM3P21266 225 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 CSTF2P33240 577 aaKnown RBP eCLIP11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 GATMP50440 423 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 CLCNKAP51800 687 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 ERVFC1P60507 584 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 EEF1A2Q05639 463 aaKnown RBP11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 CD47Q08722 323 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 FGFBP1Q14512 234 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 MLIPQ5VWP3 458 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 FAM83HQ6ZRV2 1179 aaPredicted RBP11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 BBS1Q8NFJ9 593 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 SLC5A11Q8WWX8 675 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 ADAMTS10Q9H324 1103 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 ZCCHC3Q9NUD5 404 aaKnown RBP11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 WNT6Q9Y6F9 365 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 COL2A1P02458 1487 aaPredicted RBP11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 NAV1Q8NEY1 1877 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 TO15178 435 aa11.62□□□□□ -0.55
ERGIC1-208ENST00000520399 SMAD9O15198 467 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms