RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 BACE1P56817 501 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 SLC8A3P57103 927 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 SRPXP78539 464 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 GABPAQ06546 454 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 MFGE8Q08431 387 aaPredicted RBP3□□□□□ -1.93
VPS13B-207ENST00000518569 STXBP2Q15833 593 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 SMU1Q2TAY7 513 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 CCDC152Q4G0S7 254 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 CAVIN4Q5BKX8 364 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 AP1ARQ63HQ0 302 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 RGS9BPQ6ZS82 235 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 GPRIN3Q6ZVF9 776 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 Q71RC1 249 aaPredicted RBP3□□□□□ -1.93
VPS13B-207ENST00000518569 LPCAT2Q7L5N7 544 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 RNF130Q86XS8 419 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 OR4N5Q8IXE1 308 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 ABHD12Q8N2K0 398 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 GANCQ8TET4 914 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 FAM222BQ8WU58 562 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 CHPT1Q8WUD6 406 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 SHC3Q92529 594 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 RASL10AQ92737 203 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 ULK4Q96C45 1275 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 AP2M1Q96CW1 435 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 PSMB7Q99436 277 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 UBAC1Q9BSL1 405 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 CHCHD5Q9BSY4 110 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 TBCDQ9BTW9 1192 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 ACPTQ9BZG2 426 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 IQCGQ9H095 443 aaKnown RBP3□□□□□ -1.93
VPS13B-207ENST00000518569 NAPBQ9H115 298 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 MMADHCQ9H3L0 296 aaPredicted RBP3□□□□□ -1.93
VPS13B-207ENST00000518569 S100A14Q9HCY8 104 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 AATFQ9NY61 560 aaKnown RBP eCLIP3□□□□□ -1.93
VPS13B-207ENST00000518569 GTSE1Q9NYZ3 720 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 SPG21Q9NZD8 308 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 ZNF319Q9P2F9 582 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 TEKT2Q9UIF3 430 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 ZNF510Q9Y2H8 683 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 NOSIPQ9Y314 301 aaKnown RBP3□□□□□ -1.93
VPS13B-207ENST00000518569 TMED5Q9Y3A6 229 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 ETV7Q9Y603 341 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 PBRM1Q86U86 1689 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 CACNA1FO60840 1977 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 SYNJ1O43426 1573 aa3□□□□□ -1.93
VPS13B-207ENST00000518569 SPAG9O60271 1321 aaKnown RBP2.99□□□□□ -1.93
VPS13B-207ENST00000518569 ARPC4-TTLL3A0A0A6YYG9 625 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 RNF103-CHMP3A0A140T963 221 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 LINC00854A0A1B0GVQ3 168 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 ATP6AP2A0A1C7CYW4 349 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 BCLAF3A2AJT9 711 aaKnown RBP2.99□□□□□ -1.93
VPS13B-207ENST00000518569 SRRM4A7MD48 611 aaKnown RBP2.99□□□□□ -1.93
VPS13B-207ENST00000518569 A8MU76 341 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 RIPK2O43353 540 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 FMO6PO60774 539 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 IGHV3-13P01766 116 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 ZNF853P0CG23 659 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 UROSP10746 265 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 ODC1P11926 461 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 SKILP12757 684 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 ANPEPP15144 967 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 GATA1P15976 413 aaPredicted RBP2.99□□□□□ -1.93
VPS13B-207ENST00000518569 GPC3P51654 580 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 PRELPP51888 382 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 SLC26A5P58743 744 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 GMFBP60983 142 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 ARF5P84085 180 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 CBX3Q13185 183 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 ENPP2Q13822 863 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 SLC1A5Q15758 541 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 INAQ16352 499 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 IMMTQ16891 758 aaKnown RBP2.99□□□□□ -1.93
VPS13B-207ENST00000518569 ZNF674Q2M3X9 581 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 KCTD11Q693B1 232 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 CD164L2Q6UWJ8 174 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 KCTD9Q7L273 389 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 ASPGQ86U10 573 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 LRRC49Q8IUZ0 686 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 LAX1Q8IWV1 398 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 OR6F1Q8NGZ6 308 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 PSMA8Q8TAA3 256 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 CCDC110Q8TBZ0 833 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 SUN5Q8TC36 379 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.99□□□□□ -1.93
VPS13B-207ENST00000518569 GGHQ92820 318 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 PTP4A1Q93096 173 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 TUBGCP3Q96CW5 907 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 EPSTI1Q96J88 318 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 CNDP1Q96KN2 507 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 GUCD1Q96NT3 240 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 PYGO2Q9BRQ0 406 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 SLC39A3Q9BRY0 314 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 OCR1Q9BZK8 76 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 THAP9Q9H5L6 903 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 MAGEF1Q9HAY2 307 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 KCNK13Q9HB14 408 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 QPCTLQ9NXS2 382 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 THYN1Q9P016 225 aa2.99□□□□□ -1.93
VPS13B-207ENST00000518569 ERVK-19Q9WJR5 959 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms