RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 IDNKQ5T6J7 187 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 UBE2UQ5VVX9 321 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 STEAP3Q658P3 488 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 SLC25A24Q6NUK1 477 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 SLC39A5Q6ZMH5 540 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 TEX26Q8N6G2 289 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 FAM83FQ8NEG4 500 aaPredicted RBP10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 ELOA3Q8NG57 546 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 UFD1Q92890 307 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 TMEM246Q9BRR3 403 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 TBL1XR1Q9BZK7 514 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 REEP4Q9H6H4 257 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 NEUROD4Q9HD90 331 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 HCFC1R1Q9NWW0 138 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 HRASLS2Q9NWW9 162 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 ING4Q9UNL4 249 aa10.37□□□□□ -0.75
PCDHGA1-202ENST00000517417 FAM172BPA6NC97 362 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 TRIM64CA6NLI5 447 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 FAM170BA6NMN3 283 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 KAT7O95251 611 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 TNFP01375 233 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 ASGR2P07307 311 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 YES1P07947 543 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 C1GALT1C1LP0DN25 315 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 RPS26P62854 115 aaKnown RBP10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 RAB33AQ14088 237 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 EIPR1Q53HC9 387 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 SLC35F1Q5T1Q4 408 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 LCN1P1Q5VSP4 162 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 MLIPQ5VWP3 458 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 ATCAYQ86WG3 371 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 CLECL1Q8IZS7 167 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 LNX2Q8N448 690 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 CHCHD4Q8N4Q1 142 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 GINS4Q9BRT9 223 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 ASPNQ9BXN1 380 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 MKKSQ9NPJ1 570 aaPredicted RBP10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 PHF11Q9UIL8 331 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 IFT52Q9Y366 437 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 H3BSH0 61 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 SRPRAP08240 638 aaKnown RBP10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 IL3P08700 152 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 SPINT3P49223 89 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 RNF144AP50876 292 aaPredicted RBP10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 YBX1P67809 324 aaKnown RBP10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 ZXDBP98169 803 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 SF3B4Q15427 424 aaKnown RBP eCLIP10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 PRPF38BQ5VTL8 546 aaKnown RBP10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 REEP3Q6NUK4 255 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 ZNF367Q7RTV3 350 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 PARP16Q8N5Y8 322 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 SUN5Q8TC36 379 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 NKD1Q969G9 470 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 SCRN2Q96FV2 425 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 MGLLQ99685 303 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 UCK2Q9BZX2 261 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 SMURF1Q9HCE7 757 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 DNAJC27Q9NZQ0 273 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 WDR45Q9Y484 360 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 OR6C70A6NIJ9 312 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 CLDN24A6NM45 220 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 CLCA1A8K7I4 914 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 PCDHGA12O60330 932 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 JRKO75564 520 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 TGFBR1P36897 503 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 DHPSP49366 369 aaPredicted RBP10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 TBPL1P62380 186 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 MC1RQ01726 317 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 PTPRRQ15256 657 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 EXOC3L2Q2M3D2 409 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 DEFB134Q4QY38 66 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 SYT6Q5T7P8 510 aaPredicted RBP10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 ARL9Q6T311 187 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 KLHL24Q6TFL4 600 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 CRTC1Q6UUV9 634 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 TCEANCQ8N8B7 351 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 PSD4Q8NDX1 1056 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 APIPQ96GX9 242 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 SLC39A13Q96H72 371 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 CPPED1Q9BRF8 314 aaPredicted RBP10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 BEX2Q9BXY8 128 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 KCNN2Q9H2S1 579 aa10.36□□□□□ -0.75
PCDHGA1-202ENST00000517417 A0A1W2PQU0 124 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 KHNYNO15037 678 aaKnown RBP10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 ADAM12O43184 909 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 MRPS14O60783 128 aaKnown RBP10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 CPNE3O75131 537 aaKnown RBP10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 SLC16A8O95907 504 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 CSF2P04141 144 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 RAB25P57735 213 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 CYHR1Q6ZMK1 362 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 Q6ZPB1 254 aaPredicted RBP10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 LYSMD2Q8IV50 215 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 OR5M3Q8NGP4 307 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 KLHL6Q8WZ60 621 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 RHBDF1Q96CC6 855 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 DOHHQ9BU89 302 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 TSSK6Q9BXA6 273 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 IRF2BPLQ9H1B7 796 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 FZD3Q9NPG1 666 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms