RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 MCL1Q07820 350 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 GALNT1Q10472 559 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 SYPL1Q16563 259 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 HNRNPA1L2Q32P51 320 aaKnown RBP-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 FGD3Q5JSP0 725 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 IZUMO3Q5VZ72 239 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 FAM219BQ5XKK7 198 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 TSSK4Q6SA08 328 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 TMPRSS11BQ86T26 416 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 SREK1Q8WXA9 508 aaKnown RBP-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 TAF4BQ92750 862 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 HDHD3Q9BSH5 251 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 POLR3GLQ9BT43 218 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 ZMYND12Q9H0C1 365 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 NT5DC2Q9H857 520 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 EHD2Q9NZN4 543 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 UVRAGQ9P2Y5 699 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 POLKQ9UBT6 870 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 ZNF215Q9UL58 517 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 NOB1Q9ULX3 412 aaKnown RBP-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 FOXJ3Q9UPW0 622 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 STRCP1A6NGW2 1772 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 THSD7BQ9C0I4 1608 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 DOPEY1Q5JWR5 2465 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 CACNA1AO00555 2505 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 SCN1AP35498 2009 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 PIKFYVEQ9Y2I7 2098 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 IGKV1-6A0A0C4DH72 117 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 GOLGA6L3A6NEY3 463 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 KLF8O95600 359 aaPredicted RBP-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 ANGPTL1O95841 491 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 IGHV3-9P01782 118 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 NBPF7P0C2Y1 421 aaPredicted RBP-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 PPIAL4GP0DN37 164 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 COX7A2P14406 83 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 FOSL2P15408 326 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 IGHV1-2P23083 117 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 PTPN4P29074 926 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 TLE2Q04725 743 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 ACSM1Q08AH1 577 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 RBBP4Q09028 425 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 ZNF816Q0VGE8 651 aaPredicted RBP-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 IL18R1Q13478 541 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 DPYSL3Q14195 570 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 OPCMLQ14982 345 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 ADIPOQQ15848 244 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 ANKRD55Q3KP44 614 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 DNAJC21Q5F1R6 531 aaKnown RBP-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 PAGE3Q5JUK9 113 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 RAET1GQ6H3X3 334 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 OR4A47Q6IF82 309 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 CXorf57Q6NSI4 855 aaKnown RBP-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 GGT6Q6P531 493 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 CYB5D1Q6P9G0 228 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 ACP7Q6ZNF0 438 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 ZNF100Q8IYN0 542 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 RNF168Q8IYW5 571 aaPredicted RBP-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 BATF2Q8N1L9 274 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 GBP7Q8N8V2 638 aaPredicted RBP-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 CCNYQ8ND76 341 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 OR10S1Q8NGN2 331 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 TRAF3IP1Q8TDR0 691 aaPredicted RBP-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 SSMEM1Q8WWF3 244 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 LIPHQ8WWY8 451 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 PIGCQ92535 297 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 RAB3CQ96E17 227 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 RPGRIP1Q96KN7 1286 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 BTBD9Q96Q07 612 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 TEX13AQ9BXU3 409 aaPredicted RBP-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 DPEP2Q9H4A9 486 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 GDF3Q9NR23 364 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 NANSQ9NR45 359 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 NLE1Q9NVX2 485 aaPredicted RBP-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 PCDHGA5Q9Y5G8 931 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 OR51B4Q9Y5P0 310 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 SLC25A15Q9Y619 301 aa-1.74□□□□□ -2.69
RNU6-539P-201ENST00000516665 TRIP11Q15643 1979 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 FEZF1A0PJY2 475 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 TTC36A6NLP5 189 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 A8MUA0 341 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 TK1P04183 234 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 FCGR3AP08637 254 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 CT45A10P0DMU9 189 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 HSD17B1P14061 328 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 TSPAN8P19075 237 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 SFTPDP35247 375 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 CIRBPQ14011 172 aaKnown RBP-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 GNMTQ14749 295 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 UBE2SQ16763 222 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 PFKFB4Q16877 469 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 DEFB134Q4QY38 66 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 PARP10Q53GL7 1025 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 ANKRD45Q5TZF3 282 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 FBXW9Q5XUX1 488 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 C11orf63Q6NUN7 778 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 SLC22A25Q6T423 547 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 SLFN11Q7Z7L1 901 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 PCGF5Q86SE9 256 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 THEM5Q8N1Q8 247 aa-1.75□□□□□ -2.69
RNU6-539P-201ENST00000516665 SCFD2Q8WU76 684 aa-1.75□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms