RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 LCORQ96JN0 433 aaPredicted RBP8.33□□□□□ -1.08
NUP54-211ENST00000512151 SGCZQ96LD1 299 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 KCNK17Q96T54 332 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 TTC1Q99614 292 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 KIFC1Q9BW19 673 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 SFXN3Q9BWM7 321 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 ANGPTL4Q9BY76 406 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 CALHM2Q9HA72 323 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 SAYSD1Q9NPB0 183 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 PSD3Q9NYI0 1048 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 BFARQ9NZS9 450 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 SOX13Q9UN79 622 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 ZCWPW2A0A1B0GU75 182 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 AP3B1O00203 1094 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 ADAM11O75078 769 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 NIPSNAP2O75323 286 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 RNH1P13489 461 aaKnown RBP8.32□□□□□ -1.08
NUP54-211ENST00000512151 IMPA1P29218 277 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 OCRLQ01968 901 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 GABPB1Q06547 395 aaPredicted RBP8.32□□□□□ -1.08
NUP54-211ENST00000512151 CUL1Q13616 776 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 KLHL38Q2WGJ6 581 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 ZNF791Q3KP31 576 aaPredicted RBP8.32□□□□□ -1.08
NUP54-211ENST00000512151 FASTKD1Q53R41 847 aaKnown RBP8.32□□□□□ -1.08
NUP54-211ENST00000512151 LYPD8Q6UX82 237 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 THSD4Q6ZMP0 1018 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 CCDC25Q86WR0 208 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 ZBED8Q8IZ13 594 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 GCNT2Q8N0V5 402 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 PDIK1LQ8N165 341 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 CA13Q8N1Q1 262 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 FBXO36Q8NEA4 188 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 PPHLN1Q8NEY8 458 aaKnown RBP8.32□□□□□ -1.08
NUP54-211ENST00000512151 INTS12Q96CB8 462 aaKnown RBP8.32□□□□□ -1.08
NUP54-211ENST00000512151 ZC3HAV1LQ96H79 300 aaKnown RBP8.32□□□□□ -1.08
NUP54-211ENST00000512151 C1orf159Q96HA4 380 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 JSRP1Q96MG2 331 aaPredicted RBP8.32□□□□□ -1.08
NUP54-211ENST00000512151 BIRC8Q96P09 236 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 PANX3Q96QZ0 392 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 MED18Q9BUE0 208 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 UGT2B28Q9BY64 529 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 TXLNGYQ9BZA5 131 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 IL22Q9GZX6 179 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 AICDAQ9GZX7 198 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 SLCO5A1Q9H2Y9 848 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 TREX1Q9NSU2 369 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 TMEM160Q9NX00 188 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 QPCTLQ9NXS2 382 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 ZNF226Q9NYT6 803 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 CHMP2BQ9UQN3 213 aa8.32□□□□□ -1.08
NUP54-211ENST00000512151 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 OVOL3O00110 214 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 KPNA5O15131 536 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 EIF3HO15372 352 aaKnown RBP eCLIP8.31□□□□□ -1.08
NUP54-211ENST00000512151 NDUFS4O43181 175 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 NDUFS7O75251 213 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 TNFSF13O75888 250 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 ACSL3O95573 720 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 SYF2O95926 243 aaKnown RBP8.31□□□□□ -1.08
NUP54-211ENST00000512151 IGHV4-39P01824 125 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 PGRP06401 933 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 THBS1P07996 1170 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 CDH1P12830 882 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 RPS3P23396 243 aaKnown RBP eCLIP8.31□□□□□ -1.08
NUP54-211ENST00000512151 GDF1P27539 372 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 ARNTP27540 789 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 ATP5DP30049 168 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 SSTR1P30872 391 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 IDUAP35475 653 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 HSD17B2P37059 387 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 MAGEA4P43358 317 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 GPX6P59796 221 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 RAB8AP61006 207 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 KCNJ2P63252 427 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 FAM174BQ3ZCQ3 159 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 SLC22A10Q63ZE4 541 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 HIST2H2BDQ6DRA6 164 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 HSDL2Q6YN16 418 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 ZNF704Q6ZNC4 412 aaPredicted RBP8.31□□□□□ -1.08
NUP54-211ENST00000512151 CENPUQ71F23 418 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 HDXQ7Z353 690 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 MEX3DQ86XN8 651 aaKnown RBP8.31□□□□□ -1.08
NUP54-211ENST00000512151 PM20D2Q8IYS1 436 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 EIF1ADQ8N9N8 165 aaKnown RBP8.31□□□□□ -1.08
NUP54-211ENST00000512151 UTP15Q8TED0 518 aaKnown RBP8.31□□□□□ -1.08
NUP54-211ENST00000512151 PAQR8Q8TEZ7 354 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 FMO2Q99518 471 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 TUBA1CQ9BQE3 449 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 SGPP1Q9BX95 441 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 FAM129AQ9BZQ8 928 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 ESRP2Q9H6T0 727 aaKnown RBP8.31□□□□□ -1.08
NUP54-211ENST00000512151 RIMKLBQ9ULI2 386 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 BOKQ9UMX3 212 aaPredicted RBP8.31□□□□□ -1.08
NUP54-211ENST00000512151 LAMP3Q9UQV4 416 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 DTX4Q9Y2E6 619 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 MAD1L1Q9Y6D9 718 aa8.31□□□□□ -1.08
NUP54-211ENST00000512151 PRKDCP78527 4128 aaKnown RBP8.3□□□□□ -1.08
NUP54-211ENST00000512151 A0A0G2JK05 382 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.3□□□□□ -1.08
NUP54-211ENST00000512151 MAGEB16A2A368 324 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms